| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr4_2263 |
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| Symbol | |
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| ID | 4252834 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. MR-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008321 |
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| Strand | - |
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| Start bp | 2704608 |
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| End bp | 2707256 |
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| Gene Length | 2649 bp |
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| Protein Length | 882 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 638118888 |
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| Product | TonB-dependent receptor |
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| Protein accession | YP_734391 |
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| Protein GI | 113970598 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG4771] Outer membrane receptor for ferrienterochelin and colicins |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.594677 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 0.894337 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCACCATT TAACGTTAGC AGCTAAAGCT GTACGCGCTA GTATTATCAC TATGGGTTCT
GCCAGTGTTT TATTTTCAGG CATGACAATT GCGGCAGAGG AAAATGCTAA AGTTGAACGT
ATAGAAGTGA CTGGTTCACG TATTAAACAG GTGGATATGG AAACTGTTTC GCCTGTTACT
GTGATTAATG CGGCAGATAT TGCCATGACG GGTGAGAAAA CCGTAGCGGA TGTTTTAAAT
AACTCGGCGA TAAATAGTTT TGGTTCATGG CGTGGCATTT CAGGATATGG TTCGGGGGCG
AGTTCAACGA GCAATGTTAA CCTTCGTGGC TTAGGCTCAT CGGCAACACT TGTGTTGCTT
GATGGTCGGC GCATGCCAGG CACTAGCTCA AGCTCAGGCT CGGTTGCCGA TACCTCTTCT
ATCCCAATGG CGATTGTTGA ACGCATCGAA ATTCTGCGTG ATGGTGCTTC TGCGGTTTAT
GGTTCTGATG CAGTGGCTGG TGTAATCAAT ATTATTACGA AGAAAGAATT TGATGGCCTG
CAATTAGATT ACAGCACTGA GCAACCGAGA GTTGAAGGTG GTGATGCTAA TCGCTTGTCG
ATTGCAACGG GCTATAACAC CGATAAAGGT AATATTACCT TGACCTATGA ATATTATGAT
ACCAAAGCGG TAATGGATCG TGATATTTGG AATATGGATG ATCCGAGTTA TTCGGCTTAC
AGTGGTTTTA GTTCTGTGCC TAATGGCAGT TCGGCATCGG GTTGGTATAG CAATTCAGAA
ATTTGTGAGC AAACTGAAAA TACCGTAGAT ACAACCGATG GCAATAATGT TGGTCGTTGT
TTATATAACC ATGGCAACGT GACTAAATTA TTTGGTGACC AAACTCGTAA CTCTATTTTA
TCGAACTTTT CCTATGAAAT TACTGACACG ATTCAATTCC GCGGCCGCGC ATCAGCCTCG
TTAGCAGAAA CTGAAACCCG TTACGCCGGA ACGCCAGTAT CGACTAATTA TCCGGTTATG
AGCGCTGATA ATAAATTTAA TCCACTAGGG GAGGATATGA CGCTTTATAT GCGCTCCGCT
CAAATTGGTG AGCGCGATAC CTTAACTGAA ACAAATAATG TCGATATTTT AGGTGGCTTT
GTCGGTACCC TTGATTTCGG TAATGGTATT GATTGGGAAC TAAATGCACA GCATTCCCGC
TCGACCACGA ATTCATTTAA TTATAATTTG ATTAACGATG AAATTGTTCA ACAAGGGATA
GATTCTGAAC AATACGATAT TTTTAATACC TCGGGTATGA GTTACCAACA ATGGAACCAG
CAAATGACCG AGCTGTATCG CAAAGCGGCT CATACAGGTG TGTATCAAGG TAAGTTTGAG
AGTACGCAAC TCGATGGTTT AGCCTCAACA CTGCTAGTCG ATAACGGCGA TGTCTCTGTT
GCTATGGTCG GTGGGCTTGA GTATGAAATG ATCAAATTCA AGCAGACCAG TGATCCTGAA
TCCGCATCGG GCATTATTTC GGGTGGCTCT GGTGGTGATG ACGTAGATGC TGAACGTGAT
CGCTCGGCGG CTTATTTAGA ATTCCAAGTC GGATTACCAG CTAATGTTGA GTTGTCGGCT
GCGGTTCGCT ATGAACGCTA TGAACAGGAA GGTTCGCTCA CGGGGGCTCA GGGTCAAGTG
GTTAATTCAT CGACCTTCGA TGCTGTGGTA CCTAAGTTTG GGTTAAGTTG GCGTCCTGTT
GATAGCCTAT TATTGCGGGC AAGTTATGGG GATTCTTTCC GCGCACCAAA TATGAGTGAA
ATGTTCTCAT CTCAATCGTT AAGTTTTGAA AAGGCTGTCG ATTCCCTGTG GTGTAATGAG
CCAGGTAACG TTGATGCCGT TTACTGTGCG ACCAATAACC AGCACAAAAC CTGGTACGGC
GGTAATCCTG ACCTTGAGGC AGAGGAGGGC AATTCGCTGA CTTTAGGTGG AGTCTGGAAT
GTCACCGATG ATTGGAACGT TGAGTTATCT TATTTTTCAA TTACCTATGA CAATAAGATT
GAATCTGTCG ATGTAGATGA CATCCTGCGT GATGAAATCA AGAATGGCTC GTCACCTTAT
ATTCACCGTG GTGCCGATGG CAAGATTGAA TATATCGAAG CGGGCGTTCG TAACTTAGCC
TCGGTTGAAA CCTCGGGTAT CGATTTTGTA ACCGCCTATA ACCTTGAAAC GGCAATAGGT
GACTTTAACT TCAAAGTCGA TCTGACCCAT GTTCTTGACT TTAAAAAGCA AGATAATGCC
GAAGCCGAGA TGATTGATTA CGCGGGCGTG ACAGATACAC CCGATTGGCG TGGTAACTTT
GCGACGAGCT GGAAATATGA AGATTTTTCA GCAGCGTGGA CTGTTGTGTA TATAGGTAGT
CAATCGGCCG ATTACTACAA TACCTTGGAA GAGACCGATC GTTACGTCGA TTATTCTAGC
TACTTCAAAC ACAATATCCA GTTTGCTTAT AGCCATGCTT ACAACGGCAC AATCACGGTT
GGGGTCAATA ATCTGTTCGA TGCCGATGCA CCTAACTACT ACACCTATGC CGATTATCGC
GATGTAAACG TCGGCCTCTA TGATGTATTA GGTCGTACTT ATTATCTGAG AATTAATCAG
AAGTTTTAA
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| Protein sequence | MHHLTLAAKA VRASIITMGS ASVLFSGMTI AAEENAKVER IEVTGSRIKQ VDMETVSPVT
VINAADIAMT GEKTVADVLN NSAINSFGSW RGISGYGSGA SSTSNVNLRG LGSSATLVLL
DGRRMPGTSS SSGSVADTSS IPMAIVERIE ILRDGASAVY GSDAVAGVIN IITKKEFDGL
QLDYSTEQPR VEGGDANRLS IATGYNTDKG NITLTYEYYD TKAVMDRDIW NMDDPSYSAY
SGFSSVPNGS SASGWYSNSE ICEQTENTVD TTDGNNVGRC LYNHGNVTKL FGDQTRNSIL
SNFSYEITDT IQFRGRASAS LAETETRYAG TPVSTNYPVM SADNKFNPLG EDMTLYMRSA
QIGERDTLTE TNNVDILGGF VGTLDFGNGI DWELNAQHSR STTNSFNYNL INDEIVQQGI
DSEQYDIFNT SGMSYQQWNQ QMTELYRKAA HTGVYQGKFE STQLDGLAST LLVDNGDVSV
AMVGGLEYEM IKFKQTSDPE SASGIISGGS GGDDVDAERD RSAAYLEFQV GLPANVELSA
AVRYERYEQE GSLTGAQGQV VNSSTFDAVV PKFGLSWRPV DSLLLRASYG DSFRAPNMSE
MFSSQSLSFE KAVDSLWCNE PGNVDAVYCA TNNQHKTWYG GNPDLEAEEG NSLTLGGVWN
VTDDWNVELS YFSITYDNKI ESVDVDDILR DEIKNGSSPY IHRGADGKIE YIEAGVRNLA
SVETSGIDFV TAYNLETAIG DFNFKVDLTH VLDFKKQDNA EAEMIDYAGV TDTPDWRGNF
ATSWKYEDFS AAWTVVYIGS QSADYYNTLE ETDRYVDYSS YFKHNIQFAY SHAYNGTITV
GVNNLFDADA PNYYTYADYR DVNVGLYDVL GRTYYLRINQ KF
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