| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr4_2261 |
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| Symbol | |
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| ID | 4252832 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. MR-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008321 |
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| Strand | + |
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| Start bp | 2702821 |
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| End bp | 2703768 |
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| Gene Length | 948 bp |
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| Protein Length | 315 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 638118886 |
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| Product | dihydrouridine synthase, DuS |
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| Protein accession | YP_734389 |
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| Protein GI | 113970596 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0042] tRNA-dihydrouridine synthase |
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| TIGRFAM ID | [TIGR00737] putative TIM-barrel protein, nifR3 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.214187 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 0.298412 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGCGCGTAA TTTTGGCTCC GATGGAAGGC GTGGTTGACG ACTTAATGCG AGATATTTTG
TCTTCAATTA ACCCCTACGA TTTGCTCGTC ACCGAATTTG TGCGCGTGGT TGACCAACTC
TTACCCGAAA AAGTGTTTCT CAAACTCTGC CCCGAACTGC TCAATGGCGG CTTTACCCCC
TCGGGCACGC CGGTTCGTGT ACAGCTTTTA GGGCAAGAGC CCAACTGCAT GGCCGAAAAC
GCGATGCGCG CGATTGAGCT TGGCTCCCAC GGCGTCGATG CAAACTTTGG TTGCCCCGCT
AAGATGGTGA ACCGCAGTAA TGGCGGCGCG GTGTTGCTGC AATACCCTAA TACGATTCAC
GATATTGTGC GTGCCATGCG CCAAGCCGTG CCCGCCGAGC ATCCGGTGAC GGCGAAAATT
CGTTTAGGCT ACGAAGACAA ATCCCTGTTT ATGGAAAATG CGCTGGCCGT TTATGAAGCG
GGCGCGACAG AACTGGCTAT CCATGCCCGC AGTAAGGTCG ATGGTTACAA ACCGCCCGCC
TACTGGGAAT ACATTACCGA AGTGCGCGAG CGTTTGCCCA TTCCAGTGAT TGCTAATGGT
GAGATTTGGA ACCGCGAAGA TGCCGAGCGT TGTATGGCGG TGACGGGCTG CGACAGCATT
ATGATAGGCC GCGGCGCGAT TTCGCTGCCT AATCTTGCCG ACACGATTAA GACTGGCGCG
GCGCCTTATC GCTGGGCCGA CACCTTAGGT TTGATGCTCA GCTACACCCA ACGCGAGCTG
AGCGGCCGTA AGAGTGATTA TTATCCGGCG CGAATTAAGC AGTGGTTTAG TTATCTCAAT
CGCCAATACC CCGAGGCGGA CACCCTGTTT AGGGAGCTAC GCATCTATAA AACCACAGAG
GAAATTGTGC GAGTGCTAGA AGAGGCGCAG CTACGCCTTA ATCAATAA
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| Protein sequence | MRVILAPMEG VVDDLMRDIL SSINPYDLLV TEFVRVVDQL LPEKVFLKLC PELLNGGFTP
SGTPVRVQLL GQEPNCMAEN AMRAIELGSH GVDANFGCPA KMVNRSNGGA VLLQYPNTIH
DIVRAMRQAV PAEHPVTAKI RLGYEDKSLF MENALAVYEA GATELAIHAR SKVDGYKPPA
YWEYITEVRE RLPIPVIANG EIWNREDAER CMAVTGCDSI MIGRGAISLP NLADTIKTGA
APYRWADTLG LMLSYTQREL SGRKSDYYPA RIKQWFSYLN RQYPEADTLF RELRIYKTTE
EIVRVLEEAQ LRLNQ
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