| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr4_2241 |
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| Symbol | |
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| ID | 4252812 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. MR-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008321 |
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| Strand | - |
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| Start bp | 2679723 |
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| End bp | 2680718 |
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| Gene Length | 996 bp |
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| Protein Length | 331 aa |
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| Translation table | 11 |
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| GC content | 40% |
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| IMG OID | 638118865 |
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| Product | fimbrial protein |
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| Protein accession | YP_734369 |
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| Protein GI | 113970576 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG3539] P pilus assembly protein, pilin FimA |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.0288255 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 0.0430038 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATGTTTC TATCTGAGAA GAAAATGCTG TGGCTAATTT TTGCTCTAGT TGGTCTGGTT
TTTTTTTGTT TTATCTTTAT TGCTAAAGCT GAAGCTTGCA GCGCTAACGC TATCTACAGC
AATCGCTCGC TAGGGAGTGT TAGTGTGCCA GCCAATGTGT CAATAGGCCA ACAGCTAGCA
CTATTTGGCT CTTTTAGTGG GAGTGCTTCT GCTCTGAACT GCGGTTATAT ACCTTATATG
TGGTTAGCTT TTGAGCAGCC CATGGTAAAG TCGAGCGTCA CATATAATGG ATATGAAGTG
TACGATACCA ACGTTGATGG AGTTGGAGTT CAAGTATACA CTACCTTCGG TAAGACAGTC
ATGATTGGTA ACACACCTAA GTACTGGTAT CAACATAATA CATCTGGCGG TGCTGCGTAT
CTTGCCTCTA TATATGTGCG GTTTATTGTT ACCGGGCCTT TAAAGTCAGG AGTGATACAG
TTACCTATTC CAACAATTAA AGCATTAACA AGCAGATATT ATTCGGTTGT ATCATCAGAT
TCTGCTATTT ATAACAGAAT GGGTTTTGGA TCTTCAATAG TAACAGCCCC AACATGCACT
GTAAATAATT CAGAGCAAAC TGTTTTACTC CCTGAGGTTT CAACAAGTGA CTTCTTAGGT
GTTGGAACAA CAGCTGAAAG CGTGCCATTT GGGATTGTGT TAGATTGTGA TGCAGGAGTT
TCTGTCTATG CTACTGTTAG TGATACTAAC CAATTAAGTA ATACTGGGCC TAACTTATCT
CTTGATGGTT CCTCGACTGC ATCGGGGGTT GGTATTCAAT TATTACAGAG TGGCAATCCT
TTATCATTTG GCAATCCTGT TTATATCTCT GGAACAGGAA TACCTTCGGC GAGTACTTAT
TCTGTGCCGT TTGAAGCACG TTATGTACAA ACTTCAACAA TTATAAATCC TGGGACAGTC
ATAGCCAAAA CAGTGATTTC ATTCAGTTAC CTATAA
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| Protein sequence | MMFLSEKKML WLIFALVGLV FFCFIFIAKA EACSANAIYS NRSLGSVSVP ANVSIGQQLA
LFGSFSGSAS ALNCGYIPYM WLAFEQPMVK SSVTYNGYEV YDTNVDGVGV QVYTTFGKTV
MIGNTPKYWY QHNTSGGAAY LASIYVRFIV TGPLKSGVIQ LPIPTIKALT SRYYSVVSSD
SAIYNRMGFG SSIVTAPTCT VNNSEQTVLL PEVSTSDFLG VGTTAESVPF GIVLDCDAGV
SVYATVSDTN QLSNTGPNLS LDGSSTASGV GIQLLQSGNP LSFGNPVYIS GTGIPSASTY
SVPFEARYVQ TSTIINPGTV IAKTVISFSY L
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