| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr4_2237 |
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| Symbol | |
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| ID | 4252809 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. MR-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008321 |
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| Strand | - |
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| Start bp | 2674465 |
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| End bp | 2675013 |
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| Gene Length | 549 bp |
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| Protein Length | 182 aa |
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| Translation table | 11 |
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| GC content | 41% |
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| IMG OID | 638118862 |
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| Product | fimbrial protein |
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| Protein accession | YP_734366 |
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| Protein GI | 113970573 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG3539] P pilus assembly protein, pilin FimA |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 0.0169653 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAATAAAA AAATTATTTC TTTAGCAATT GCATGTTTAC CCGTAATCGT GGTGCCAACA
GCTAAAGCAT CGACAGGAAC CATTACATTT AACGGTGAAG TTACATCGTC GACTTGTACT
GTTAAAGTTA ATGGCACCAG TGCAGATGCA GTTGTTACAC TTCCAACTGT TTCTACTTCG
GATTTAGCCG CAGACACTGT GGTAGCAGGT AGAACAACAT TCACAATTAA TTTGTCAGAA
TGTACTCTGG ATGCAAATCA GTCACAGGTT GTTGCTTTCT TTGAGAGCGG CACAAATGTT
GTGGCTACTA CTGGCCGTTT GAAAAATAAT GGTACGGCAG GAAATGTCTC TTTGCAATTG
CTTGATGCGG TGAATTCAAG TGTTATTAAG GCTGGCGATG AAGGTCAGAA AACAAGTAAT
ACAGCAACAA CTGTAGCCGG GGATGGTACA GCGATTCTAC CATATGCTGT TGAATATTAT
GCTGAAGGTG CAGCGGCAAC TGCTGGCACA GTTACTTCTA GTGTCACTTA TTCTATTCAT
TATATGTAA
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| Protein sequence | MNKKIISLAI ACLPVIVVPT AKASTGTITF NGEVTSSTCT VKVNGTSADA VVTLPTVSTS
DLAADTVVAG RTTFTINLSE CTLDANQSQV VAFFESGTNV VATTGRLKNN GTAGNVSLQL
LDAVNSSVIK AGDEGQKTSN TATTVAGDGT AILPYAVEYY AEGAAATAGT VTSSVTYSIH
YM
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