| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr4_2234 |
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| Symbol | |
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| ID | 4252806 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. MR-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008321 |
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| Strand | - |
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| Start bp | 2670121 |
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| End bp | 2671137 |
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| Gene Length | 1017 bp |
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| Protein Length | 338 aa |
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| Translation table | 11 |
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| GC content | 37% |
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| IMG OID | 638118859 |
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| Product | fimbrial protein |
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| Protein accession | YP_734363 |
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| Protein GI | 113970570 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG3539] P pilus assembly protein, pilin FimA |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.22557 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 0.0194534 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTTTTTTG CAATAAAGTT TCGTTTTTGT GTTTTTTGTT TACTTTTATT TTTCAGCGAA
AAAATATTGG CATATTGTAC AAGTGTTGGG GCTCCTAATG TATATCTAAA TGCAAGTATT
AATATGGGTG ATGTATCTCA AGGGGATATG AGTGACTCTA GTGTATTTAC TTCTGATTGG
TATACAACTG GAGGAAATGG GTTGTACTGG ACCTTTTATG GTTGCTCTTC AGCAGGAAGT
TCACATTGGT TTTACTCCCC TAATTCGCAA ATAGAAACTA TTGATTCTAC CGCGATGTTT
GCTACTAATA ATCCGAATGT TTTTTATGAA CTATGGGTAA AAGATAGTGG TGGTCCTTGG
ATTAATTTGG CTACTATATC AAGTAGACAT GTTAATTTAC GTAATCATCC GGATGGTAAC
GGCTGGTACT CGGCACACTA CAAAACTCGA TTTCATGTAA GGGGAGTTAT CGATAAAGGA
ATTCATCAAG TTTATGGAGG ATTAGGGTAT GCATATTTAT CTGAGAATCA ATACTCAAAT
AATGGCTATG TAAGTCGGGA CGTTTCATAT TTATTTACAG TGAATGTCAA CCCAGGTACA
TGTTCTTTTT CAACGGAAGA TGATAATAAG GTTGTTAATT TGCCAACTGT GAATGTTGGT
GATTTTAATG GTGTTGGAAC TGGCGCTGGG GAAAAAAACT TTAACCTGAA TGTGACTTGT
CAAAGTGGAA CAAAAGCTTA TATCAGTTTT TCAGATGCTT ATAACTCGAG TAACTCTAGC
GATTCTCTAT CTACATTGAC CTCAACGACA TCTGCCGATG GGGTTAATAT ACAGATTCTA
TCGAACAACT GGGGGGGGGC AATTGTACTA AATACACCAT TTTATGTTGT TGGTGCTGAT
GACTCGGCCG CTGCGAGTTA CACCATTCCA TTTTCAGCTA GATATATACA AGTGGACCCA
GTTTTGACTG CAGGAACAGT TGAGGCAAAA ACAATAGTTG TTATGACTTA TGAATAG
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| Protein sequence | MFFAIKFRFC VFCLLLFFSE KILAYCTSVG APNVYLNASI NMGDVSQGDM SDSSVFTSDW
YTTGGNGLYW TFYGCSSAGS SHWFYSPNSQ IETIDSTAMF ATNNPNVFYE LWVKDSGGPW
INLATISSRH VNLRNHPDGN GWYSAHYKTR FHVRGVIDKG IHQVYGGLGY AYLSENQYSN
NGYVSRDVSY LFTVNVNPGT CSFSTEDDNK VVNLPTVNVG DFNGVGTGAG EKNFNLNVTC
QSGTKAYISF SDAYNSSNSS DSLSTLTSTT SADGVNIQIL SNNWGGAIVL NTPFYVVGAD
DSAAASYTIP FSARYIQVDP VLTAGTVEAK TIVVMTYE
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