| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr4_2226 |
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| Symbol | |
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| ID | 4252799 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. MR-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008321 |
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| Strand | + |
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| Start bp | 2660082 |
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| End bp | 2663846 |
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| Gene Length | 3765 bp |
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| Protein Length | 1254 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 638118852 |
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| Product | respiratory nitrate reductase alpha subunit apoprotein |
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| Protein accession | YP_734356 |
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| Protein GI | 113970563 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG5013] Nitrate reductase alpha subunit |
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| TIGRFAM ID | [TIGR01580] respiratory nitrate reductase, alpha subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.459309 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 0.0879237 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGTAAGT TTCTTGACCG GTTTCGCTAT TTCAAACAAG TCGGAGATAC ATTTTCCGGC
GACCACGGCC AAACATTGCA TACTAATCGA GAATGGGAAG ATGGTTATCG TAGCCGCTGG
CAACACGATA AAATCGTTCG TTCAACCCAT GGAGTAAATT GTACCGGTTC TTGTAGTTGG
AAAATTTACG TAAAAAATGG TCTTGTAACA TGGGAAACAC AACAAACCGA TTATCCCAGA
ACCCGCCCCG ATTTACCTAA CCATGAGCCG CGCGGATGCC CTCGAGGTGC CAGCTACTCT
TGGTATCTCT ACAGTGCTAA CCGTCTTAAA TATCCTATGG TACGTAAACC GCTGCTTAAA
CTCTGGCGAG AAGCTAAACA GCGTTTTACG GATCCAGTTC ATGCTTGGGA ATCGATAGTC
ACGAATCAAA CTGCAGCAAA GGAATATAAA TCTGCACGTG GTCGTGGTGG TTTTGTTCGC
AGTTCATGGG TAGAGGTCAA TGAAATCATT GCTGCATCAA ACGTTTATAC CATCAAACAG
CATGGCCCTG ACCGAGTTGT CGGCTTCTCG CCAATCCCTG CAATGTCGAT GGTATCTTAT
GCTGCGGGAG CACGTTATTT ATCACTTATC GGCGGTTCAT GTTTAAGTTT CTATGACTGG
TATTGCGACC TCCCACCAGC ATCTCCGATG ACTTGGGGTG AGCAAACTGA CGTCCCAGAA
TCTGCCGATT GGTATAACTC TTCTTATATC ATCGCTTGGG GCTCAAATAT TCCACAAACT
CGTACCCCAG ACGCACATTT CTTCACAGAA GTCAGATACA AAGGCACTAA AACTGTCGCC
ATTACTCCTG ATTATGCAGA AGTCGCAAAA CTTTGCGATC ACTGGCTCAA TCCCAAGCAA
GGAACCGATA GCGCCGTCGC CTTAGCCATG GGGCATGTGA TTCTGCGAGA ATTCCACGTC
AATCGACAAT CAGAGTATTT CCAAAATTAC CTGCGCCAGT ATTCGGATAT GCCCATGCTG
GTACAATTAG ATCCTCGTGA AGATGGTAGT TTTGCCGCAG GTCGTTTTCT ACGCGCCTCG
GATCTGATTG ATAAACTTGG TGAAGAAAAC AATCCTGATT GGAAGACAGT CGCCATTAAT
GATCAAAATG GCGAACTGGT TGCACCGAAT GGCACAGCAG GTTATCGCTG GGGTGAAAAA
GGCAAATGGA ACCTGGCGCA GCTAGCTGGT AAAGACCAAG ACAAAGTGAA GTTACGTCTT
GGGATTCATA ATGAAGATCA TATTGTTGAC GTTGCCTTTC CATACTTTGG CGGTATAGAA
CATGAACATT TCAGCAGTGT CCCCTTAAAA GATCTTATCC ATCGAAAACT GCCTGTAAAA
CGTATCCAAC TTGCTGATGG AAGCGAAACG TATGTTACAA CGGTATACGA TTTAACCTTA
GCAAACTACG GCGTTGAACG CGGTTTGCAG GATCCAAGCT GCGCACAAAC CTATGCCGAT
GTAAAAGCAT ACTCCCCTGC TTGGGCAGAG AAAATCACTG GTGTCGCAGC CGATGAAATC
ACCCGCATTG CCCGTGAATT TGCAGATAAC GCAGAAAAAA CTCGTGGCCG TTCGATGATT
ATCGTCGGCG CAGGATTAAA CCACTGGTAT CACATGGATA TGAACTACCG CGGATTAATC
AACATGTTGG TCTTCTGTGG TTGCGTGGGG CAAAGTGGCG GCGGCTGGGC TCACTATGTC
GGCCAGGAAA AACTGCGCCC GCAAACGGGT TGGCAGCCAC TGGCATTTGG CCTCGATTGG
CAAAAACCTC CACGTCATAT GAACGGCACG TCCTTTTTCT ACAATCACTC AAGCCAATGG
CGCTATGAGA AATTAAAAAC CGAAGAGCTG CTGTCCCCTC TTGCTGATAA ATCACGTTAT
AGCCAGCACT TAATCGACAT GAACGTTAAA GCTGAACGTT TAGGTTGGTT ACCGTCATCG
CCACAACTGA ACGTCAATCC ATTACACATT GCCAAGCAGG CAAATAGCGT AGGGTTATCG
CCAACAGATT ACACGGTTAA AGCTTTAAAA GAAGGTACTA TTCGCTTCGC AGCTGAGCAA
CCAGAAGATC ACTATCCGCG TAACATGTTT ATCTGGCGCT CAAACCTGCT AGGTTCATCG
GGCAAAGGCC ATGAATACTT ACTCAAGTAT TTATTGGGTA CCGAACACGG TATTCAAGGG
AAAGACTTAG GTGAAATGAG TGCCGAAAAA CCTAATGAAA TCGAATGGAA AGATACCCCC
ACTCAAGGCA AGCTAGATTT AGTGGTGACT CTAGACTTCC GGATGTCAAG CACCTGCTTA
TTCTCGGACA TAGTATTACC AACGGCGACC TGGTACGAAA AGGACGATAT GAATACTTCG
GATATGCATC CATTCATTCA TCCGTTATCC GCAGCAGTAG ACCCAGCATG GGAAGCTAAA
TCAGACTGGG ACATTTACAA GGGGATTACC AAGGCATTTT CCAAAGTCTG TGAAGGCCAC
CTTGGAAAAG AGACTGATGT AGTGACTCTG CCAATCCAGC ATGACTCGCC CGCGGAAATT
GCTCAAGCAT TTGACGTGCG AGACTGGAAG CTAGGCGAAT GTGACCTCAT TCCAGGAAAA
ACTGCACCTC ACATAACAAC TGTTGAACGG GATTATCCCA ATACTTATGC TCGCTTTACG
GCTTTGGGTC CACTGTTAAC AAGCCAAGGC AATGGCGGTA AAGGGATTAA CTGGAACACC
GACAGCGAAG TCGAACTACT TAAAAAACTC AACTATGTAC ACCACGATGG CATAGCACAG
GGCTTAGCAA AGATTGAATC AGCAATCGAC GCTGCTGAAG TCATCTTGGC TCTAGCGCCT
GAAACCAACG GCCATGTTGC AGTGAAAGCT TGGGATGCTC TAAGTGAGGT CACAGGGCTT
GAACATCGGC ATCTTGCCAT CAATAAAGAA GATGAAAAAA TCCGCTTCCG CGATATTCAA
GCTCAGCCAC GAAAGATTAT TTCTAGCCCG ACCTGGTCAG GCCTTGAAGA TGAGCACGTT
TCCTACAACG CAGGTTATAC CAACGTCCAT GAGTTTATTC CTTGGCGTAC CGTGACTGGG
CGTCAGCAAC TCTACCAAGA TCACCAATGG ATGCGTGACT TCGGTGAAAG CTTGATTGCC
TACCGCCCCC CCATCAATAC CCGCACGGTA CACGAAATTA TGGGAAAAAA AGGTAATGGC
AATAAGGAAA AAGCATTGAA TTGGATCACA CCACATCAAA AATGGGGGAT CCACTCAACC
TATAGCGAAA ACCTATTAAT GCTGACCCTA TCCCGAGGTG GACCAATCGT CTGGATGAGT
GAAGACGATG CTAAAGACTT AGGCATTGAA GATAACGATT GGATTGAAGC CTTCAATAGC
AATGGCTCAT TAACTGCTCG CGCGGTAGTC AGCCAACGAG TACCAGAAGG CATGGTGATG
ATGTATCACG CCCAAGAACG TTTGGTGAAC ATTCCTGGAT CAGAAATTAC CGGGCAACGC
GGTGGTATTC ATAACTCGGT CACTCGAGTT TGCCCAAAGC CCACGCATAT GATTGGAGGC
TATGTCCATC AAGCCTACGG CTTTAACTAT TATGGCACTG TGGGTTCTAA CCGAGATGAG
TTTGTCGTTG TTCGTCGCAT GAATAACGTT AACTGGTTAG ACAACGAAAA TAATGATCAC
AAACAAGCAC CCAATATGCA CAGCGGTCTG TCTGGGGAGA AATAA
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| Protein sequence | MSKFLDRFRY FKQVGDTFSG DHGQTLHTNR EWEDGYRSRW QHDKIVRSTH GVNCTGSCSW
KIYVKNGLVT WETQQTDYPR TRPDLPNHEP RGCPRGASYS WYLYSANRLK YPMVRKPLLK
LWREAKQRFT DPVHAWESIV TNQTAAKEYK SARGRGGFVR SSWVEVNEII AASNVYTIKQ
HGPDRVVGFS PIPAMSMVSY AAGARYLSLI GGSCLSFYDW YCDLPPASPM TWGEQTDVPE
SADWYNSSYI IAWGSNIPQT RTPDAHFFTE VRYKGTKTVA ITPDYAEVAK LCDHWLNPKQ
GTDSAVALAM GHVILREFHV NRQSEYFQNY LRQYSDMPML VQLDPREDGS FAAGRFLRAS
DLIDKLGEEN NPDWKTVAIN DQNGELVAPN GTAGYRWGEK GKWNLAQLAG KDQDKVKLRL
GIHNEDHIVD VAFPYFGGIE HEHFSSVPLK DLIHRKLPVK RIQLADGSET YVTTVYDLTL
ANYGVERGLQ DPSCAQTYAD VKAYSPAWAE KITGVAADEI TRIAREFADN AEKTRGRSMI
IVGAGLNHWY HMDMNYRGLI NMLVFCGCVG QSGGGWAHYV GQEKLRPQTG WQPLAFGLDW
QKPPRHMNGT SFFYNHSSQW RYEKLKTEEL LSPLADKSRY SQHLIDMNVK AERLGWLPSS
PQLNVNPLHI AKQANSVGLS PTDYTVKALK EGTIRFAAEQ PEDHYPRNMF IWRSNLLGSS
GKGHEYLLKY LLGTEHGIQG KDLGEMSAEK PNEIEWKDTP TQGKLDLVVT LDFRMSSTCL
FSDIVLPTAT WYEKDDMNTS DMHPFIHPLS AAVDPAWEAK SDWDIYKGIT KAFSKVCEGH
LGKETDVVTL PIQHDSPAEI AQAFDVRDWK LGECDLIPGK TAPHITTVER DYPNTYARFT
ALGPLLTSQG NGGKGINWNT DSEVELLKKL NYVHHDGIAQ GLAKIESAID AAEVILALAP
ETNGHVAVKA WDALSEVTGL EHRHLAINKE DEKIRFRDIQ AQPRKIISSP TWSGLEDEHV
SYNAGYTNVH EFIPWRTVTG RQQLYQDHQW MRDFGESLIA YRPPINTRTV HEIMGKKGNG
NKEKALNWIT PHQKWGIHST YSENLLMLTL SRGGPIVWMS EDDAKDLGIE DNDWIEAFNS
NGSLTARAVV SQRVPEGMVM MYHAQERLVN IPGSEITGQR GGIHNSVTRV CPKPTHMIGG
YVHQAYGFNY YGTVGSNRDE FVVVRRMNNV NWLDNENNDH KQAPNMHSGL SGEK
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