| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr4_2224 |
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| Symbol | |
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| ID | 4252797 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. MR-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008321 |
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| Strand | - |
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| Start bp | 2656085 |
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| End bp | 2657854 |
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| Gene Length | 1770 bp |
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| Protein Length | 589 aa |
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| Translation table | 11 |
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| GC content | 33% |
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| IMG OID | 638118850 |
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| Product | nitrate/nitrite sensor protein NarX |
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| Protein accession | YP_734354 |
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| Protein GI | 113970561 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG3850] Signal transduction histidine kinase, nitrate/nitrite-specific |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.129909 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 0.0788983 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGTTATAT CATCATGGGT ATCGAATAGT CTCCAAGGAA GTGCCCATGC AATAGATGAG
ATAGGCTCAA TGCGAATGAA AAGTTACCGA CTACTTTCAT TTTTACCCTT AGAGAATGAA
CAGAAGTTAT TGTTGGCCAA CTCGCCATTT ATCAGTAAGT TGAATATAGG CCAAAATCAA
TTAAATAAGG GTGAGGATGT TGTTAAATTA AAGGTTTTTT TAGAGAGGGA GGATTTAATC
AACGATTTTA ATGATTTGTA TCAATATTGG AGTTTACAGT TACAACCAAC ATTACTATCG
GCAAAAGCAG CAAGTGATGC TAGGGTTAAG GTCGATTTTT TTGTGGCTAA GCTAGATAAC
CTAGTAAAAA AAATAGATAG TAATACAGAA GTAAAGTTAA AGCTTGTATC TCGAGTTCAT
AGTGTTTTTA TCTTTTTAAG TGTACTGTTA ACTATAGTTG GGGTCTTTTT TTTAAATTTA
CGAATATTTC GCCCTTGGCA AGAGCTATTA AGGATAGCTA ACAGCATTAG TTCAGGTGAT
TTTAGTCAGC GATTCAGGGA AAGAAAATAT CATGATGAAA TGACTATTCT TGGTGATGCT
ATGAGTTGTA TGTCAACTCA ATTAAGAAAG ATGTATGATG AGTTAGAACG TAGAGTTCAA
CAAAAAACAC TACATATACG TGAACAAAAT CTTTGGTTAT CTTTCCTGTA CCGTTCGAGC
AATCAACTTC ATAGTTCGGC ATCTACATGT TTACGTTATT TCCCTATATT AAAAGAGTTG
GAAGAATTAA TACCTTTTAC ATCAATGCAG TTACGTTTGT ATGAATACAA TAACTCAAAT
AATTTTGAAC AATTTAAAAC ATCTAACACA GTTAGGCCAA AATATTGTGC CGATCATGAA
TGTGAATTGT GTTTAGATAA TAGTTTTAGT CAATCTACAT TAAATTGTAA AATGTTAGAA
TGGCCGCTTA GGGATCAGTA TGGTGAATAT GGAGTAATGA TAGCTTACTG CTTAAATGAT
CAAGATTTAA CTCCTTTGCA GTCTCAATTG GTTAAAACAT TAGTGGAGCA ATTGTCAACA
TCATTAGCTT TAGAATATCA AGATTATAAA AATAAACAGC TTATGATAAT GGATGAAAGA
GCAGTTATTG CAAGAGAACT TCATGATTCG ATTGCCCAAT CACTGTCTTG TTTGAAAATA
AAAGTAAGCT GTTTACAAAT GCAGAGTAAA AATCTAGGTG CTGAACAGTT AGTGCTGATT
CAAGAAATGC GTACCGAACT TAACTCTGCA TACAGCCATT TGAGAGAGTT ACTTACAACC
TTTAGACTGA AACTCAATGA ACCGGGATTA CATCCTGCAT TGGAGTCAAC GATAGAAGAG
TTCAATCAAA AGTTAGGTTT TTCCATTGAA TTAATTTATC AATTACCGCC AAATTGTGTG
AGTTCACATC AAGCTATTCA TTTAGTTCAT ATCGTGCGAG AAGCGCTAAG TAACATATAC
AAACATGCTA ATGCAGATTG TGCTGTGGTT CAATTAGACT TTGATCCTAT TCATAATCAT
ATTCAAGTCG TCATACGAGA TAATGGTATA GGTCTCAGTG GTGATATGGC AAAAGTAAAT
CATTATGGAA TATCTATAAT GAATGATCGT GCAAAAAACC TCCCAGGTAA GTGCTCTATA
GATAATCATT TAAATGGTGG CGTTGAGGTA AAGATTTTAT TTAATGCTAC TTATTCCTCT
TTAATTAAAA ATGGAGATGA TAATGTGTAA
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| Protein sequence | MVISSWVSNS LQGSAHAIDE IGSMRMKSYR LLSFLPLENE QKLLLANSPF ISKLNIGQNQ
LNKGEDVVKL KVFLEREDLI NDFNDLYQYW SLQLQPTLLS AKAASDARVK VDFFVAKLDN
LVKKIDSNTE VKLKLVSRVH SVFIFLSVLL TIVGVFFLNL RIFRPWQELL RIANSISSGD
FSQRFRERKY HDEMTILGDA MSCMSTQLRK MYDELERRVQ QKTLHIREQN LWLSFLYRSS
NQLHSSASTC LRYFPILKEL EELIPFTSMQ LRLYEYNNSN NFEQFKTSNT VRPKYCADHE
CELCLDNSFS QSTLNCKMLE WPLRDQYGEY GVMIAYCLND QDLTPLQSQL VKTLVEQLST
SLALEYQDYK NKQLMIMDER AVIARELHDS IAQSLSCLKI KVSCLQMQSK NLGAEQLVLI
QEMRTELNSA YSHLRELLTT FRLKLNEPGL HPALESTIEE FNQKLGFSIE LIYQLPPNCV
SSHQAIHLVH IVREALSNIY KHANADCAVV QLDFDPIHNH IQVVIRDNGI GLSGDMAKVN
HYGISIMNDR AKNLPGKCSI DNHLNGGVEV KILFNATYSS LIKNGDDNV
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