| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr4_2221 |
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| Symbol | |
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| ID | 4252794 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. MR-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008321 |
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| Strand | + |
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| Start bp | 2653237 |
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| End bp | 2654103 |
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| Gene Length | 867 bp |
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| Protein Length | 288 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 638118847 |
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| Product | LysR family transcriptional regulator |
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| Protein accession | YP_734351 |
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| Protein GI | 113970558 |
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| COG category | [K] Transcription |
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| COG ID | [COG0583] Transcriptional regulator |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.0572523 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 0.568575 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATAAATC CACAATGGCT CAATACCTTT GCAGTGTTAG TGGAAAAGGG AAACTTTACC
CGAACGGCCG AAGCCATAGG TATCACCCAA GCCGCGGTCA GCCAACATAT CAGTCGCTTA
GAGGAAGAAT ACGGCACTCT ATTTTTGCGC CGTAGCCGCC AACTCGAAAT CACCCCCGTT
GGTGAGCATT TGTTGAGTTA CGTCAAAGAC ATAAACTGCG CCCAGAAGCG ATTACAGCAA
AAACTCATCC AAGATGATGC CCATATTGGC GAAATTAGCC TTATCACCCC AGGCAGTATC
GGCTTAACAC TTTACCCATT GCTCTTACAG CTACAAACGG AGTTTTCGCA GCTAAAAATT
CATCATCGTT TTGCCCCCGA TAATGAAATC CTCTCCGCTA TTCTGACCAA TCAACATGAG
TTTGGGATGG TAACTTTTAA GCCATCGGAT CCTAGTATTT GCAGTCGCCA TTTTACCGAA
GAACCGCTCG AGTTGGTTGT GCCCGCAGGG CATAAAATCG CTGATTGGCA AGATTTACAG
CGCATCGGAT TTATCTCTCA CCCCGATGGC GAAGCCATGG CAACGCGTTT ACTGAGTCGT
AAATATCCAG GGAGTCCTGG CATCCAAGAG ATCCCCTGCA AAGGTTTTAT CAATCAGATC
AGTTTAATCC TCGAACCCGT TGCCAAGGGG CTCGGCTTTA CCGTGATCCC TCGCTATGCC
CGTAAAGCCT TTGAACGACA AGATGAAATC TATGTGGTTG AGTGTGGCAG CCCAGTGGTA
GACACCATTT GGCTGATCCA CAGAGCCGAG TGGCCTTTAT CACGTCGGGC ACAAAAAGCG
ATCGCCTACT TAAAAAATAA AATTTAA
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| Protein sequence | MINPQWLNTF AVLVEKGNFT RTAEAIGITQ AAVSQHISRL EEEYGTLFLR RSRQLEITPV
GEHLLSYVKD INCAQKRLQQ KLIQDDAHIG EISLITPGSI GLTLYPLLLQ LQTEFSQLKI
HHRFAPDNEI LSAILTNQHE FGMVTFKPSD PSICSRHFTE EPLELVVPAG HKIADWQDLQ
RIGFISHPDG EAMATRLLSR KYPGSPGIQE IPCKGFINQI SLILEPVAKG LGFTVIPRYA
RKAFERQDEI YVVECGSPVV DTIWLIHRAE WPLSRRAQKA IAYLKNKI
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