Gene Shewmr4_2209 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewmr4_2209 
Symbol 
ID4252782 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. MR-4 
KingdomBacteria 
Replicon accessionNC_008321 
Strand
Start bp2641726 
End bp2642595 
Gene Length870 bp 
Protein Length289 aa 
Translation table11 
GC content48% 
IMG OID638118835 
ProductIon transport protein 
Protein accessionYP_734339 
Protein GI113970546 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value0.427173 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCAGATC TGTCGCCTGA AAAACCAGAC ACCGAAAGCC CATTAAAACG CCAGCTACGC 
ACTATTATTT TTGGCACTGA TACGCCCGCA GGGCGCTATT TTGATATTGG CTTAATGGTC
TGTATTGTGC TCAGTGTTGC GCTGGTGTTC CTCGATACGG TCGAAGCGGT TCACCAAGAT
TATGGGCACA TCATTCGCGT TTTAGAGTGG GTGTTTACGC TGATTTTTAC CATTGAATAT
GGTTTAAGGT TGTACTGCGC GACCCATCCT GTGTCGTATG CCCGCAGCTT TTACGGTTTA
GTGGATTTAT TGTCAGTATT GCCGAGTTAT CTGGCGCTGT TTATTCCTGG GGCGAATTTC
ACCTTAGTGA TCAGGGTGCT GCGCCTCTTT AGGATCTTTA GGGTACTGAA ACTACTGCGC
TATTTAAGCG AAGGTAATCT GCTGCTCAAG GCCATGTTGC AGTCGAGCCG CAAGGTGTTT
TTGTTTTTCT TCTCGGTGAG TTTAATCATC ATGGTGTTAA GCGCCGTGAT GTATGTGGTC
GAAGGCCCTG AGAATGGTTT TAGCTCTATC CCCAAATCCG TCTACTGGAC AATTGTGACA
ATCACCACTG TAGGTTACGG CGATATCACG CCGAAAACCG AATTAGGTCA AGCGATTGCG
GCTTTTACTA TGTTGCTGGG TTATTCGATT ATTGCGATCC CAACGGGGAT TTTAACGGCG
GAAATTTCCC AAGAAGTGGG CCGGCACAGG GATCTGCGTT CCTGCAATCA ATGTCATAAG
ATGGGCCACG ATCTCGATGC CACCTATTGT AATCGTTGCG GTTGTGAGCT GGATAAGCTC
GAAGCGCCCC ACGGGAAAGG GGATAAGTAA
 
Protein sequence
MSDLSPEKPD TESPLKRQLR TIIFGTDTPA GRYFDIGLMV CIVLSVALVF LDTVEAVHQD 
YGHIIRVLEW VFTLIFTIEY GLRLYCATHP VSYARSFYGL VDLLSVLPSY LALFIPGANF
TLVIRVLRLF RIFRVLKLLR YLSEGNLLLK AMLQSSRKVF LFFFSVSLII MVLSAVMYVV
EGPENGFSSI PKSVYWTIVT ITTVGYGDIT PKTELGQAIA AFTMLLGYSI IAIPTGILTA
EISQEVGRHR DLRSCNQCHK MGHDLDATYC NRCGCELDKL EAPHGKGDK