| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr4_2204 |
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| Symbol | |
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| ID | 4252777 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. MR-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008321 |
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| Strand | + |
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| Start bp | 2634269 |
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| End bp | 2635468 |
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| Gene Length | 1200 bp |
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| Protein Length | 399 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 638118830 |
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| Product | cystathionine beta-lyase |
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| Protein accession | YP_734334 |
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| Protein GI | 113970541 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0626] Cystathionine beta-lyases/cystathionine gamma-synthases |
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| TIGRFAM ID | [TIGR01324] cystathionine beta-lyase, bacterial |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 25 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACAGATA AACATCAGCT AGCCACCCAA ATCGTCAGCG TCGGTCGAGA TAAAAAATGG
ACCAAGGGCG TGATTAACCC GCCCGTATTT CGCGCATCGA CTATCGTCTT CGACACAATG
GAAGACATGC GTCACGCCGC CAAAAACAAA ACCAATGGCG AAATGTTCTA TGGCCGCCGT
GGTACCCCAA CCCATTTTGC GTTTCAGGCA GCGATCAGTG AGCTCGAAGG TGGCGTAGGT
ACGGCGCTGT ATCCCTCAGG TGCAGCGGCG ATTAGCGCGG CTTTGTTATC GTTTTTACAG
GCGGGCGATC ACCTGCTGAT GGTCGACAGT GTGTACGAGC CAACCCGCGA TCTCTGTAGC
CATATTCTGG CGGGCTTTAA TATTGAGACC ACCTATTACG ATCCCCTGAT TGGTGAAGGT
ATTCGCGCGC TTATTCGCCC CAATACTAAG GTGCTGTTTT TAGAGTCTCC CGGCTCCATC
ACCATGGAAG TGCAGGACGT CCCGACCCTA TGCCGTATCG CCCATGAACA TGGAATGGTG
ACCATTCTCG ACAACACTTG GGCCTCACCA ATCAATAGCA AGCCCTTTGA GATGGGTGTC
GATGTGTCGA TTCAAGCCGC GACCAAATAT ATCGTCGGTC ACTCTGATGT GATGATTGGC
ACCGCGACTG CCAACGAAAA GCACTGGCCG CAGCTGCGTG AACGCAGTTA TTTATTGGGG
CAAACGACTT CTCCCGATGA TGTGTATCTC GCTACGCGCG GATTACGCAC CCTTGGCGTG
CGCATGGCGC AGCATGAGAA AAATGCCCTT AAAGTGGCTA ACTGGTTGAA AACTCGCCCC
GAGGTTGACC ATTTACGTCA CCCCGCCTTT GATACCTGCC CAGGACATGA GTTCTTTAAA
CGCGACTTTA GCGCCGCCAA TGGTCTGTTC TCCTTCGTGT TAAAGCAAGG GGATCAGGAG
GCAGTGACCG CGCTCGTTGA AAATATGCAG CATTTTAAAA TGGGCTTTTC TTGGGGAGGT
TATGAGAGTC TGATCCTAGG GATTTTCGGG ATTGAAAAAA TCCGCAGTGC CACTCAGTGG
GATGCAAGCA AGCCATTGAT CCGTGTGCAT ATTGGCCTCG AAGATCCCGA TGATTTAATT
GCCGATCTCA GCGCAGGCTT CGATCGCTTT AATGCCGTAC TCGCCGCCAA GGCCAAATAA
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| Protein sequence | MTDKHQLATQ IVSVGRDKKW TKGVINPPVF RASTIVFDTM EDMRHAAKNK TNGEMFYGRR
GTPTHFAFQA AISELEGGVG TALYPSGAAA ISAALLSFLQ AGDHLLMVDS VYEPTRDLCS
HILAGFNIET TYYDPLIGEG IRALIRPNTK VLFLESPGSI TMEVQDVPTL CRIAHEHGMV
TILDNTWASP INSKPFEMGV DVSIQAATKY IVGHSDVMIG TATANEKHWP QLRERSYLLG
QTTSPDDVYL ATRGLRTLGV RMAQHEKNAL KVANWLKTRP EVDHLRHPAF DTCPGHEFFK
RDFSAANGLF SFVLKQGDQE AVTALVENMQ HFKMGFSWGG YESLILGIFG IEKIRSATQW
DASKPLIRVH IGLEDPDDLI ADLSAGFDRF NAVLAAKAK
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