Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewmr4_2201 |
Symbol | |
ID | 4252774 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. MR-4 |
Kingdom | Bacteria |
Replicon accession | NC_008321 |
Strand | - |
Start bp | 2630220 |
End bp | 2631014 |
Gene Length | 795 bp |
Protein Length | 264 aa |
Translation table | 11 |
GC content | 54% |
IMG OID | 638118827 |
Product | OmpA/MotB domain-containing protein |
Protein accession | YP_734331 |
Protein GI | 113970538 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG2885] Outer membrane protein and related peptidoglycan-associated (lipo)proteins |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.203533 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 29 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATGAAAA AGACGCTGAT TAATATCTTG GTACTGAGTG TATTCGCCGC GCCCATCGCT AGCGTATCGG CAAGGGTTTC CTTGCAAAAT CAACCTGTGC TCTCAGAGCC ACAGACTGAG ATGCTTGAGC AAGATGAGGA TGATGGCGAA GCGCTTATCG GTCTTAGCGG CGGAGCGTTA CTTGGCGCCC TAGTGGGTGG CCCCGTTGGC GCCATTATCG GTGGATTTAC CGGCACCTTA ATTGGCCAAT CGGTCTCCGA TACCGACACG GTTAAAACCC AGCAACAGCA TATTGCCCTG CAGCGCCAAC AACTGGCGAG CTTATCGTCC AAACAACAGG CCAGCGAGCA ACGCGCCGCC GAATACGCCT CAACCCAAAA GCAACTCGAT GAGCTGCTCG CCGAGCAACA ACAACTGTTA AGTGAGTTGG CGCTGGGCAT GAATGTGCAG TTCCGTACTG GTTCGTCGGA GCTTGAAAGC CATTTTTTGC CCCAATTAGA CAATGTCGCC AAGGTGATGA AGCGCTCGAG CGAGTCCAAT CTCGAGCTGA AAGGTTATGC CGACCGTCGC GGTGATCTGG CCTACAACCA AGCGCTCTCG GAGCAACGTT TGTTAGAAGT GCGGGGATAC TTGATTAAGC AAGGCGTAGC CCCCGAGCGG ATCACCACCC AAGCCTTCGG CGCCAGAATG CCGCTCAATG ATCAGCAAGA TAGTGAATCC GATGTGTTCG ATCGCCGAGT CACTTTGACC ATGCAGCCTA ACCAAGGACT GATGGCGAGC CGTGTGACCG AATAA
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Protein sequence | MMKKTLINIL VLSVFAAPIA SVSARVSLQN QPVLSEPQTE MLEQDEDDGE ALIGLSGGAL LGALVGGPVG AIIGGFTGTL IGQSVSDTDT VKTQQQHIAL QRQQLASLSS KQQASEQRAA EYASTQKQLD ELLAEQQQLL SELALGMNVQ FRTGSSELES HFLPQLDNVA KVMKRSSESN LELKGYADRR GDLAYNQALS EQRLLEVRGY LIKQGVAPER ITTQAFGARM PLNDQQDSES DVFDRRVTLT MQPNQGLMAS RVTE
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