| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr4_2200 |
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| Symbol | |
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| ID | 4252773 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. MR-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008321 |
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| Strand | - |
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| Start bp | 2627895 |
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| End bp | 2630174 |
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| Gene Length | 2280 bp |
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| Protein Length | 759 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 638118826 |
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| Product | vault protein inter-alpha-trypsin subunit |
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| Protein accession | YP_734330 |
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| Protein GI | 113970537 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG2304] Uncharacterized protein containing a von Willebrand factor type A (vWA) domain |
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| TIGRFAM ID | [TIGR01167] LPXTG-motif cell wall anchor domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 27 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATCACAG GGAAAAGGGT AAAAGAAGTT TGTCAAACAC TGGCGATGCT AGTGATCGGC
GCCTCCATTT GTTGGGGGCT ACCATTTGCG GTGTTAGCCT CACCGAACAG TGTCGGCACC
TTATCGGCGC CACAAAATAT TGCCGCGACC TTCGATGAAC ACACAGCGAG CACATTGCCA
GCTTTCAGTT TCGATGACGT CACCCAAGGG ATGTTGGTGT ATCAAACCGC CAGCGGCCGT
TTAATGCCGT CCTTACCCGT GGACACGCAG GTGTCGATGC AGGTCTCGGG GTTAACCAAT
AGGGTGAGCG TAAAGCAGGT TTTCAGTAAT CAAACGGGAT TTGTCCTCAA TGGCCGTTAT
CTGTTCCCTT TACCCAATGA GGCGGCGGTG GACTCACTGC GTTTGCACAT TGGAGAGCGG
ATCATCGAAG GTCAAATTCA CCCAAAGCAG CAAGCAAAAC AGATTTTTGA GCAGGCCAAA
GCCGAAGGGA AACGCGCCAG TCTAGTCAGC CAAGAACGGC CCAATATGTT CACGACCGAA
GTAGCCAACC TTGCTCCCGA TGAGGAGTTG GTGGTCGAAA TCAGCTATCA AGAAACCATT
CATTATGAAG ATGGTCTCTT TAGCCTACGT TTTCCGCTGG TGGTGGCGCC GCGCTATATT
CCTGGGTTAA CGCTAGGCGG AAACAATCAT GAGCGCGTGA CCAGCAGCCA AGTCTTCGAT
GCTGACCGAA TTATTGCCCC GATCCGCGAT GCCAGTAGTG AGACGGATCC CGTGCTTAAG
GCCGATATTA AGGTCAAGCT CGGTGAAGGC GTGGACAAAT CCGCCGTAGT GAGTCCGTAT
CATCCCATTA CGATTGATGA AAAACAGGGC CAACTGACGG CGGCCTTGGC TAATCGCGTG
CCCGCTAATC GTGACTTTGT GCTGCAATGG CGTCTTAAGC AGGGCACCAG TCCCGTGGCT
TGGGTATTCA ACCAAGCGGG CAAAACCCAT ACGACGCAGG ACGATAATGC GAGTGCAGAT
AGTGGTTCAA CTGCCAGTGT CGATGGGAAT AGCAATAGCA ACAATAACTA CAGCTTAGTG
ATGGTCCTGC CGCCCAAAGT CGAGGCCAGT GAACAACCGA ACTTGCCCCG TGAGCTTATT
TTAGTGATTG ATACATCGGG GTCGATGGCA GGAGATTCCA TCATTCAGGC AAAAAATGCC
CTGCGTTATG CGCTGCGCGG TTTAAGGCCA CAGGATAGTT TTAACATTAT CGAATTTAAC
TCAGATGTGT CTTTACTGTC GTCAACACCG CTGCCCGCGA CCGCGACTAA TCTCGCCATG
GCACGTCAGT TTGTGAATCG TTTGCAGGCC GATGGTGGCA CCGAAATGGC GCAGGCTTTA
AATTCCGCGC TGCCAAGACA AGCGTTTAAC ACAGCGTCGG GTGAGGATAA GTCGTTAAGA
CAAGTGATCT TTATGACCGA TGGCTCAGTC GGTAATGAGT CGGCGTTGTT TGAGTTAATC
CGCAATCAAA TCGGCGACAA CCGTCTTTTC ACCGTCGGCA TTGGCTCGGC GCCGAACTCG
CATTTTATGC AGCGTGCGGC TGAACTTGGG CGCGGTACTT TTACTTACAT TGGTGATGTG
GATGAAGTGG AGCAAAAGAT CAGCAAGTTA CTAGCCAAAA TCCAGTATCC GGTTCTGACC
GATTTGCAGG TGCGCTTTGA CGATGGCTCT GTACCTGATT ACTGGCCCGC GCCTATACCC
GATCTATATC GCGGTGAGCC GGTATTGATC AGCCTAAAGC GCCACCCACG TGAGCCTCAG
GAACTGGTGA TCTCCGGTCG TCAGGGCCAT AAAAACTGGC AACAGTCGCT ATCTTTGCAA
GCCAATGACG CAAGCCATTC TGCAATTGAT GTAGCGCAAC CCACGGCGGG ACTCGATTTG
CTCTGGGCGC GCAAACAGAT TGCGGCCTTA GAGCTGAGTA AAAACGGCGC TAACGATGAC
AAGGTCAAAC AACAGGTCAC GGCGCTGTCG CTCAACTATC ACTTAGTCAG CCCTTATACC
AGCTTGGTCG CGGTGGATTT AACCCCCATC ACCAGCAATG CCATGAGCCG CGATGCTGTG
GTGCGCCAGC ATTTACCTTT GGGGTGGCAG CCAATGGGTG TTTTGCCACA AACATCGACC
TCGAGCCGTT TCGACATGCT CTTAGGGGGC AGCGTGTTAC TGCTTGCCTT GATGTTGGCG
CTGTCGATTC GTCGCCAGCA GCGGCAGCAA CGCGCGCTGT CATTAGCGCT GAATAGTTGA
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| Protein sequence | MITGKRVKEV CQTLAMLVIG ASICWGLPFA VLASPNSVGT LSAPQNIAAT FDEHTASTLP
AFSFDDVTQG MLVYQTASGR LMPSLPVDTQ VSMQVSGLTN RVSVKQVFSN QTGFVLNGRY
LFPLPNEAAV DSLRLHIGER IIEGQIHPKQ QAKQIFEQAK AEGKRASLVS QERPNMFTTE
VANLAPDEEL VVEISYQETI HYEDGLFSLR FPLVVAPRYI PGLTLGGNNH ERVTSSQVFD
ADRIIAPIRD ASSETDPVLK ADIKVKLGEG VDKSAVVSPY HPITIDEKQG QLTAALANRV
PANRDFVLQW RLKQGTSPVA WVFNQAGKTH TTQDDNASAD SGSTASVDGN SNSNNNYSLV
MVLPPKVEAS EQPNLPRELI LVIDTSGSMA GDSIIQAKNA LRYALRGLRP QDSFNIIEFN
SDVSLLSSTP LPATATNLAM ARQFVNRLQA DGGTEMAQAL NSALPRQAFN TASGEDKSLR
QVIFMTDGSV GNESALFELI RNQIGDNRLF TVGIGSAPNS HFMQRAAELG RGTFTYIGDV
DEVEQKISKL LAKIQYPVLT DLQVRFDDGS VPDYWPAPIP DLYRGEPVLI SLKRHPREPQ
ELVISGRQGH KNWQQSLSLQ ANDASHSAID VAQPTAGLDL LWARKQIAAL ELSKNGANDD
KVKQQVTALS LNYHLVSPYT SLVAVDLTPI TSNAMSRDAV VRQHLPLGWQ PMGVLPQTST
SSRFDMLLGG SVLLLALMLA LSIRRQQRQQ RALSLALNS
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