Gene Shewmr4_2196 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewmr4_2196 
Symbol 
ID4252769 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. MR-4 
KingdomBacteria 
Replicon accessionNC_008321 
Strand
Start bp2623288 
End bp2624211 
Gene Length924 bp 
Protein Length307 aa 
Translation table11 
GC content44% 
IMG OID638118822 
Producthypothetical protein 
Protein accessionYP_734326 
Protein GI113970533 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCACTTA AGTCTGATGT TATCGCTGGA AATAATAAGA AGAATACTGG AGTAACGTTG 
ATTTCTACTC GTCTAACACC CCTAGTCATC GCCCTACTCG GCAGCAGCCC TGTGCTGGCG
GGCGAATTAA GCCTTGAACT AGGGGGATTT TATTCACAGT CTGATACCAA TATGGAAGTG
ACTAACCCTA TATCAGGGAA TAACTTCACC TTAGACTATG AATCCGATCT GCAACTGGCC
GAGAACGAGT TTTTACCCTT TGTTGAGTTA AATTATCACT TTAACGAACG GCATAATATT
TACCTCGACT GGAAACAACT CCACCGCAGC GCTGAAACTC AAGCCTTAAG TAAACCCTTT
CAAATCGAAA TCAACGATAC CATCTACGAT ATTAAGGCGG GCGGCAAACT CAGCTCCACC
TTAAATATTG ATATATTACG TGTCGGTTAC GGTTATGATG CTCTCCAAGG CAGCAATTAC
GATGTCGGCT TTTCCCTTGG TTTGCACACT ATGTTTATCA AAACGGGATT TGAAGGCGTT
ATCGGCGTCT GTCATCCCTC TGAGTTGCTC AACAATGTCT GTGGCAGCCA AGCAATCCCT
CGCATCGTCG ATGAAAATGT CACCGCCCCC CTGCCAGATT TTGGCTTATA TGCCAACTAT
GAGTTTATCC CTGGCTGGAA ACTGGCAACC CATGCCCAGT ACTTCTACAT CAAACTCAAT
GATGTAAAAG GTGAGCTTGT GGATGTCAAA CTCGGCATCG ATGCCAATAT TACCGAAAAT
TGGCGCATGA GCGTGGCCTA TAACTACTAC AAGGTCGATG TGGATATCGC CCAAAAATCA
CCGAATAAAG ATACCCAAAT CGCCGACTAT AACATTTACT ACAGTTTTAT CGGCCCAATG
CTTTCGGTGA GTTATACATT CTAA
 
Protein sequence
MALKSDVIAG NNKKNTGVTL ISTRLTPLVI ALLGSSPVLA GELSLELGGF YSQSDTNMEV 
TNPISGNNFT LDYESDLQLA ENEFLPFVEL NYHFNERHNI YLDWKQLHRS AETQALSKPF
QIEINDTIYD IKAGGKLSST LNIDILRVGY GYDALQGSNY DVGFSLGLHT MFIKTGFEGV
IGVCHPSELL NNVCGSQAIP RIVDENVTAP LPDFGLYANY EFIPGWKLAT HAQYFYIKLN
DVKGELVDVK LGIDANITEN WRMSVAYNYY KVDVDIAQKS PNKDTQIADY NIYYSFIGPM
LSVSYTF