| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr4_2195 |
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| Symbol | |
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| ID | 4252768 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. MR-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008321 |
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| Strand | + |
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| Start bp | 2622025 |
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| End bp | 2623035 |
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| Gene Length | 1011 bp |
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| Protein Length | 336 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 638118821 |
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| Product | alpha-L-glutamate ligase |
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| Protein accession | YP_734325 |
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| Protein GI | 113970532 |
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| COG category | [H] Coenzyme transport and metabolism
[J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0189] Glutathione synthase/Ribosomal protein S6 modification enzyme (glutaminyl transferase) |
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| TIGRFAM ID | [TIGR00768] alpha-L-glutamate ligases, RimK family |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.0177868 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 31 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGTGGGT GGATTTTATA TAAAGAGACC GCGACTCAGC TAAAACCTGA ATTGTATGAA
ATTGAACGTC TATTGGCAGC AGCCAAGGCC GACAATATTG AGTTAGAAGT ATATGCTCCG
GATGAGTTTG ATCTCACCGT GACCCGAGAA GATAACAAGA GTATTTTGTT AAACGGTCAA
CCCGTTGAGC TGCCAGACTT TATCATTCCG AGAATGGGAT CTGGCACCAC CTATTTTGCG
TTGGCAATTA TTCGCCATTT AGAGCGTTTA GGTGTGTACT GCTTAAACCC TTCTAAAGCC
ATTGAAATCG TTAAAGATAA GCTCTTTTCC CAGCAATTAC TGGCCGAGAA GAACTTACCT
ACGCCCAAAA CCATGCTGGT AAAGTTCCCC GTCGACATCG AACTGGTTGA ACGCCACTTA
GGTTTTCCCG TGGTAATTAA AACCCTCTCG GGTTCACAGG GAAGCGGCGT ATTTTTATCC
CATAAGGCCC GTGAATTTGA TGACTTAATG CAATTAATCG AAGCGACTAA TAAAAACGCC
AACATTATTT TGCAGGAATT TATCGCCAAC AGTCATGGCC GAGACTTACG GGTATTTACC
ATTGGTGGAC GTGTGGCGGG CTGCTACGAA CGTCGTGGAC AAGAAGATAG CTTTAAAGCC
AATGTCAGCG CGGGTGGTTC GGCGCGCCCC TTCGAGATCA CACCTGAAAT CGAATGGCTG
GCGACACAAA CCGCCAATAT TCTCGATTTA GATGTGGCGG GTATCGATTT GTTATTCGAT
AACGGCCACT ACAAGATCTG TGAAGCCAAC TCATCACCTG GTTTCGAAGG CTTAGAGTCT
TGCTTAAATG TGGATATTGC CGCACAGATT TTACACTTTA TCCGCATCCG TTTAGGCATG
TTTAATAAGG ATGAAAAAAG CAGCGAGTCA CAGCAAGCTC AAGCAACAAA GCCCGAGGTG
AGCGCATCGG CAAACGTCAA CGCGCCAGAG ACCAAACCGG CCGCTAACTA G
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| Protein sequence | MRGWILYKET ATQLKPELYE IERLLAAAKA DNIELEVYAP DEFDLTVTRE DNKSILLNGQ
PVELPDFIIP RMGSGTTYFA LAIIRHLERL GVYCLNPSKA IEIVKDKLFS QQLLAEKNLP
TPKTMLVKFP VDIELVERHL GFPVVIKTLS GSQGSGVFLS HKAREFDDLM QLIEATNKNA
NIILQEFIAN SHGRDLRVFT IGGRVAGCYE RRGQEDSFKA NVSAGGSARP FEITPEIEWL
ATQTANILDL DVAGIDLLFD NGHYKICEAN SSPGFEGLES CLNVDIAAQI LHFIRIRLGM
FNKDEKSSES QQAQATKPEV SASANVNAPE TKPAAN
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