| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr4_2193 |
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| Symbol | |
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| ID | 4252766 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. MR-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008321 |
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| Strand | - |
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| Start bp | 2620583 |
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| End bp | 2621443 |
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| Gene Length | 861 bp |
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| Protein Length | 286 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 638118819 |
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| Product | LysR family transcriptional regulator |
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| Protein accession | YP_734323 |
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| Protein GI | 113970530 |
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| COG category | [K] Transcription |
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| COG ID | [COG0583] Transcriptional regulator |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.0865555 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 29 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGATACCG ATTTACTTAA GACCTTTTTG GAAGTCTCCC GTACTCGTCA TTTTGGTAAG
GCCGCGGAAA ATCTTTACCT TACCCGCAGC GCGGTGAGCT TTCGGGTCAA ACAGCTTGAA
AGCATTCTTG GCGTCGCCTT GTTTGAGCGC CAACGCAACA ATATTCAGCC CACGCCAGCG
GGCGAACGTA TGCTTGGGCA TGCCGAAGCG GTATTAACCG CTTGGGAGCG CGCCAAGCAG
GATGTCTCCC TCAGTCAGTT ACAATCGACT CAACTCGCCA TTGGCGCAGG CCCCAATATC
TGGGATGCCT ATTTGCAGGG GCATTTACAG CATTTGCATG TGGGATTACC AGGGGTTGCA
CTTCGGACCG AAGTCTTGCC ATTAACTGTG ATGACACGGC AATTGATGGA CCGGACCTTG
GACTTGGCGA TTTCCTTCGA CCCACCCAAA CTGGACCAAT TCGAACTGGT GCAACTAGGG
CAAATCAATT TATTGCTGGT ATCCAAAACC ATGGATGTGG CGGTCAATGC GGTGCAGGCC
GGACAATATG TCAAAGTGGA TTGGGGCACG GCCTTTAATA TCCTGCATGC GCAGGAATAT
GCCGCCTTAC CCGTGCCGAC CTTACATACC AGTTCGGCCC GTATCGCCTT GGATTTTATC
TTGAATAACG GTGGCTGCGC GTTTTTACCC GAGCATTTGG TTCTGCCACT GTTGAACCGC
GGCGAGCTGC ATTTAGTTGC GGGCGCGAGC GCCATTTCAC GCAGCGTGTA TGTTGCCTAT
TGGGCCGAAA ATGACCGCTT GGAGCAAATA AAACAGGCAA TTGGCTTTTT AGCCGATAAA
ACAGTCGCTG AAACGCTGTG A
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| Protein sequence | MDTDLLKTFL EVSRTRHFGK AAENLYLTRS AVSFRVKQLE SILGVALFER QRNNIQPTPA
GERMLGHAEA VLTAWERAKQ DVSLSQLQST QLAIGAGPNI WDAYLQGHLQ HLHVGLPGVA
LRTEVLPLTV MTRQLMDRTL DLAISFDPPK LDQFELVQLG QINLLLVSKT MDVAVNAVQA
GQYVKVDWGT AFNILHAQEY AALPVPTLHT SSARIALDFI LNNGGCAFLP EHLVLPLLNR
GELHLVAGAS AISRSVYVAY WAENDRLEQI KQAIGFLADK TVAETL
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