Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewmr4_2191 |
Symbol | |
ID | 4252764 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. MR-4 |
Kingdom | Bacteria |
Replicon accession | NC_008321 |
Strand | - |
Start bp | 2618901 |
End bp | 2619809 |
Gene Length | 909 bp |
Protein Length | 302 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 638118817 |
Product | DNA ligase |
Protein accession | YP_734321 |
Protein GI | 113970528 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG1793] ATP-dependent DNA ligase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.163072 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 26 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCTCTTA CAACTCGCTC ACAGTTTTTA ACATCCACGC TCGTGCGGTG TTTAGTGTTT TTCTACGGTA TTTTCGGCTT ATTGATGGCC GTGAGTTACG CCAATCCCCA AGCGCCCAAG ATCCAATTAG CGACCGAATA TTCAAGGGAA AATAGTGCCC ACATCAGTGA TTTTCTCGTC AGCGAAAAAC TCGATGGTGT GCGCGGTTAT TGGGATGGAA AACGTTTAGT GACTCGTCAG GGCAATCCAA TCTTAGCGCC AAGTTGGTTT ACTGCGGACT TTCCAACCAC CCCAATGGAC GGTGAGTTAT GGCTTGGGCG AGGGCAGTTT GAGGCGATAT CTGGGATTAT TCGCCAAATG TCGCCGAAGG AGAGCGACTG GCAGAACGTA CGCTTTATGG TATTTGATTT ACCCGAGGCG CAAGGGAGCT TTGAAACGCG CTATCAACAG ATGCAGACTC TGCTTGCAGG TAAATCGATT TATCTTCAAG TCATTGAGCA GGTGAGGGTA GAGAGTATCG AGGCGCTTTA TCAAAAGTTG GATGCCTTGG TAGCTCAGGG CGCCGAAGGT TTAATTCTGC ATAGGCGCTC AGCCTTGTAT ACACCAGGGC GAAATCCTAA TGTGATGAAG TTAAAGCCTT ATTTGGATGC CGAAGCCAAG GTGATTGGGC ATATAGCGGG TAAAGGGCAG TTTGCTGGGC AGATGGGGGC ATTAAGAGTG CAAACACCGG ATGGCCGTGT CTTTAGTATT GGCACAGGTT TTACCCTTGC CGAGCGTCAG CATCCACCCG CCATTGGCAC GCTTATCACC TACAAATATC TTGGATTAAC CGTCAATGGC CTCCCGCGCT TTGCCAGTTA TTTGCGAATA AGAGCAGATA TGCCAGCTGA AGACAAAGAT AAAGAATAA
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Protein sequence | MALTTRSQFL TSTLVRCLVF FYGIFGLLMA VSYANPQAPK IQLATEYSRE NSAHISDFLV SEKLDGVRGY WDGKRLVTRQ GNPILAPSWF TADFPTTPMD GELWLGRGQF EAISGIIRQM SPKESDWQNV RFMVFDLPEA QGSFETRYQQ MQTLLAGKSI YLQVIEQVRV ESIEALYQKL DALVAQGAEG LILHRRSALY TPGRNPNVMK LKPYLDAEAK VIGHIAGKGQ FAGQMGALRV QTPDGRVFSI GTGFTLAERQ HPPAIGTLIT YKYLGLTVNG LPRFASYLRI RADMPAEDKD KE
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