Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewmr4_2186 |
Symbol | rbgA |
ID | 4252759 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. MR-4 |
Kingdom | Bacteria |
Replicon accession | NC_008321 |
Strand | + |
Start bp | 2614091 |
End bp | 2615032 |
Gene Length | 942 bp |
Protein Length | 313 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | 638118812 |
Product | ribosomal biogenesis GTPase |
Protein accession | YP_734316 |
Protein GI | 113970523 |
COG category | [R] General function prediction only |
COG ID | [COG1161] Predicted GTPases |
TIGRFAM ID | [TIGR03596] ribosome biogenesis GTP-binding protein YlqF |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 29 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCAATTC AATGGTATCC GGGGCACATG CACAAGGCAC GCAAAGAGAT CGAAGAGGCT ATGCCTCAGG TCGATCTGGT GATTGAGGTG CTGGACGCTC GTATTCCCTA CAGTAGTGAA AACCCCATGG TGTCAAAGCT TCGTGGCGAC AAACCTTGTA TTAAGCTACT GAATAAATCC GACTTAGCCG ATCCTGACAT CACCGCCCAA TGGATTGAAT ACCTTGAGCG TGAACAAGGG GTAAAAGCGA CTGCGATTAC TACACTGCAA CCGGGTATGT TGAAAATGCT GCCGGATCTT TGCCGTAAGT TAGTGCCGAG TCGCGATAAG ACCGAAAAGG ACATTCGCAC TATGATCATG GGGATCCCAA ACGTGGGTAA GTCCACCATT ATCAATACCT TAGCCGGTCG TGTTATCGCT AAAACCGGTA ACGAACCCGC CGTCACCAAA AGCCAGCAGC GCATTAACCT ACGCAACGGC ATTGTGCTCT CGGACACCCC TGGGATTTTA TGGCCTAAAG TCGATAACGA AGCCAGTAGC TATCGCCTCG CCGTCACGGG AGCCATTAAA GATACCGCCA TGGAATACGA AGATGTGGCA CTGTTTGCCG CAGGTTATTT CTTAAAGGCG TACCCGAAGG AAATTTGCGA GCGTTATAAC ATCAGTGAAT TACCTAAGGA TGATATGGCG TTACTCGAAG AAATCGGCCG TAAACGCGGT GCCCTGCGTC CCGGTGGTCG CATCGATTTG CATAAAGCCT CGGAAGTCGT GTTACACGAT TACCGCTCAG GTCGAATTGG CCTGTTATCC CTCGAAACCC CTGCGATGGC CGAAATCGAA AAAGCCGAAG TGGAACGCAT TCTGGCTGAA AAAGCCGCCG AGAAAGCCGC TAAGCTAGAA GCGGAAAAAC TGAAACGCTC AGGAAAACGA CATAACGTTT AA
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Protein sequence | MAIQWYPGHM HKARKEIEEA MPQVDLVIEV LDARIPYSSE NPMVSKLRGD KPCIKLLNKS DLADPDITAQ WIEYLEREQG VKATAITTLQ PGMLKMLPDL CRKLVPSRDK TEKDIRTMIM GIPNVGKSTI INTLAGRVIA KTGNEPAVTK SQQRINLRNG IVLSDTPGIL WPKVDNEASS YRLAVTGAIK DTAMEYEDVA LFAAGYFLKA YPKEICERYN ISELPKDDMA LLEEIGRKRG ALRPGGRIDL HKASEVVLHD YRSGRIGLLS LETPAMAEIE KAEVERILAE KAAEKAAKLE AEKLKRSGKR HNV
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