Gene Shewmr4_2184 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewmr4_2184 
Symbol 
ID4252757 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. MR-4 
KingdomBacteria 
Replicon accessionNC_008321 
Strand
Start bp2611832 
End bp2612737 
Gene Length906 bp 
Protein Length301 aa 
Translation table11 
GC content49% 
IMG OID638118810 
Productbifunctional methionine sulfoxide reductase B/A protein 
Protein accessionYP_734314 
Protein GI113970521 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0225] Peptide methionine sulfoxide reductase
[COG0229] Conserved domain frequently associated with peptide methionine sulfoxide reductase 
TIGRFAM ID[TIGR00357] methionine-R-sulfoxide reductase
[TIGR00401] methionine-S-sulfoxide reductase 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACAAAC TGACTGATTT TGAACGCTAT GTCATAGAAG AAAAGGGCAC TGAACGTCCC 
TTTAGCGGTG AGTATTATAA ACATGACGCT AAAGGCGTGT ATTTATGCAA AAAATGCCAT
GCGCCTTTGT ATCGATCAGA AGATAAGTTT AATGCCCACT GTGGTTGGCC AGCCTTCGAT
GATGAAATTC CGGGGGCGGT GAGTCGTCAT GTCGACGCAG ATGGTCGCCG TACCGAAATC
GTCTGTAGCC AGTGTGGCGG TCATTTAGGC CATGTGTTTG AAGGGGAATA TTTAACGCCG
AAGAATATTC GTCACTGCGT TAATTCTGTC TCCATGGTGT TTCAAGCCGC CGATGAGGTG
ACAATATCAA CGCATAAAAC GGCCTTTGCG ACCTTTGGGG CGGGCTGTTT TTGGTGTGTT
GAAGCGATTT TTAAGAGTCT GAAGGGTGTG CTGAATGTCA GCTCTGGTTA CTCGGGCGGC
GAGGCAAGCG ATGCCGATTA TAAGTCGGTG TGTTCGGGAT TAACTGGGCA TGCTGAAGTG
GTGCACATCG AGTTTGACCC CGCGCAAATC AGCTTTACAA CGTTGCTGCA GGTGTTATTT
GAGAGTCACG ATCCCACCAC GCTTAATCGC CAAGGCAACG ATAAAGGGCC GCAGTATCGC
TCAGTCGTCT TTGCCCATGA TGCGGCTCAG ATTGAAGAGA CTAACGCCAT GATTACAAAG
TTAACCGAGG CAAGGGTATT TGATGCGCCG ATCGTCACCC AAGTGGTGGC TTTTGAGTCT
TTTTATCCTG CGGAGGATTA TCACAATGAT TACTTCGCCC TGCATGGCGA GCAGCCCTAT
TGCCAAATTG TGGTAAGGCC AAAGGTTGAA AAGATCAGAG CCCTTTTTGC CGAGCTACAA
GCATAG
 
Protein sequence
MNKLTDFERY VIEEKGTERP FSGEYYKHDA KGVYLCKKCH APLYRSEDKF NAHCGWPAFD 
DEIPGAVSRH VDADGRRTEI VCSQCGGHLG HVFEGEYLTP KNIRHCVNSV SMVFQAADEV
TISTHKTAFA TFGAGCFWCV EAIFKSLKGV LNVSSGYSGG EASDADYKSV CSGLTGHAEV
VHIEFDPAQI SFTTLLQVLF ESHDPTTLNR QGNDKGPQYR SVVFAHDAAQ IEETNAMITK
LTEARVFDAP IVTQVVAFES FYPAEDYHND YFALHGEQPY CQIVVRPKVE KIRALFAELQ
A