| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr4_2171 |
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| Symbol | |
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| ID | 4252744 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. MR-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008321 |
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| Strand | - |
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| Start bp | 2600243 |
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| End bp | 2601244 |
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| Gene Length | 1002 bp |
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| Protein Length | 333 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 638118797 |
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| Product | putative transglycosylase |
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| Protein accession | YP_734301 |
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| Protein GI | 113970508 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG2951] Membrane-bound lytic murein transglycosylase B |
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| TIGRFAM ID | [TIGR02283] lytic murein transglycosylase |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.0000761177 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 26 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCAAAGA CACTCCTTAA ACGCGTTGCA GCATGTACAT TGATTTTCTT GCCCTTGATA
AGCCATAGCG CGCTAGGGCA AGATACCTCC TTCAATGATT ATCTTCTTAA GCTTAAGCAA
GAGGCGAGTG CTCAAGGCAT TAGCCAAGCG ACGCTCGATA CGGCTTTTCC GCAGATAAAA
CGCTTTAAAA AAGCCAATGT GGCCGCAGCG CCAAGCCAAT CTAAAACCCT TGAAACCTAT
CTGCCAGAAG TGGTACCGGA ATGGAAGGTG GATACGGCGC GCGTGCTCTT TAACGAGCAT
GAAGTGACGT TGACACACAT TGCTGATAAA TATCAGGTGC AGCCGCGGTT TTTAGTGGCG
CTCTGGGGCT TAGTGTCTAA CTTTGGTGAT GCGTCCGGGG ATTATCCTGT ACTGTCTGTA
ATGGCGTCGT TAGCCTTTAC GGGCGAAGAT ACGGCGCGTT ACCAGCGGGA GTTTATGGCC
GCGCTTTTGA TCATGGATAA AGAGCATCTT AAGTTTGATG ATCTTAAAAG CAATGACAAA
GGCTTTATGG GGCAAACCCA ATTGCTTCCG AGTGAATATT TAGCCTACGG CCAAGATGGC
GACGGTGATG GTAAAAAAGA CATTTGGCAC AATGTGACCG ATGCCTTTGC CTCTGCCGCG
AACCTGCTTA AGCAGCAGGG CTGGAATGGG GAGGATACCT GGGGACGTCA GGTTCAAGCA
CCGGCGGATC TGAAGGCCGA GTTTATCGGA CTCAATCAAT CCCAAACCTT AGCCAAGTGG
CAACAGCTAG GTGTCAGGCG TTTCGATAAT ACGGATTTAC CCAATCGTGA GGATATTCAC
GCTTCGCTTA TCATGCCCGA CGGCGCCAAA GGCCGAAAAT ATCTGGTCTA TGGCAATTAC
CGCGCCTTAA TGCACTGGCA AGCGGTGAAT TATTTAGGCG AGGGCGATTA TTTTGGCATC
TCTGTGGTGC ATTTATCGGA GAGAATTAAG ACTCCCCAGT AA
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| Protein sequence | MPKTLLKRVA ACTLIFLPLI SHSALGQDTS FNDYLLKLKQ EASAQGISQA TLDTAFPQIK
RFKKANVAAA PSQSKTLETY LPEVVPEWKV DTARVLFNEH EVTLTHIADK YQVQPRFLVA
LWGLVSNFGD ASGDYPVLSV MASLAFTGED TARYQREFMA ALLIMDKEHL KFDDLKSNDK
GFMGQTQLLP SEYLAYGQDG DGDGKKDIWH NVTDAFASAA NLLKQQGWNG EDTWGRQVQA
PADLKAEFIG LNQSQTLAKW QQLGVRRFDN TDLPNREDIH ASLIMPDGAK GRKYLVYGNY
RALMHWQAVN YLGEGDYFGI SVVHLSERIK TPQ
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