| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr4_2169 |
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| Symbol | |
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| ID | 4252742 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. MR-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008321 |
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| Strand | + |
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| Start bp | 2599001 |
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| End bp | 2599501 |
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| Gene Length | 501 bp |
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| Protein Length | 166 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 638118795 |
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| Product | peptidyl-prolyl cis-trans isomerase, cyclophilin type |
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| Protein accession | YP_734299 |
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| Protein GI | 113970506 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0652] Peptidyl-prolyl cis-trans isomerase (rotamase) - cyclophilin family |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.00265434 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 28 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACGATTA TTTTTACAAC CAACTTCGGT GATATCAGTA TCGAACTCGA TATGGAGCGC
GCGCCCGTTA CCGCCAAAAA CTTTATCCGC TACTGCCAAG AAGGTTTTTA TGAGCACACG
ATTTTCCATC GAGTGATCAA AGGCTTTATG ATCCAAGGCG GTGGTTTTAC CGCCAAAATG
AAGGAAAAGC CCACCCACGA GCCGATTGTC AACGAAGCCA ACAAAGGCCT ATCGAATGTG
TTGGGCACTA TCGCTATGGC CCGTACCGAT GCACCGCACT CGGCGACCGC GCAGTTTTTT
ATTAATACGG CCAACAATGA GTTCCTCGAC CACACAGCAA CCACGAACAA CGGTTGGGGT
TATGCGGTAT TTGGTAAAGT CACCGCGGGA CTCGAGGTCG TACTGCAAAT TGAAGGCGTA
AAAACCACCC GTGTTGCAGG CCATGAGGAC GTGCCACGTG AGCCGATTAT TATCGAAAAA
GTAACTATTG TTGAAAAATA G
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| Protein sequence | MTIIFTTNFG DISIELDMER APVTAKNFIR YCQEGFYEHT IFHRVIKGFM IQGGGFTAKM
KEKPTHEPIV NEANKGLSNV LGTIAMARTD APHSATAQFF INTANNEFLD HTATTNNGWG
YAVFGKVTAG LEVVLQIEGV KTTRVAGHED VPREPIIIEK VTIVEK
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