| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr4_2168 |
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| Symbol | |
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| ID | 4252741 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. MR-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008321 |
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| Strand | + |
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| Start bp | 2597492 |
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| End bp | 2598955 |
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| Gene Length | 1464 bp |
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| Protein Length | 487 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 638118794 |
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| Product | DEAD/DEAH box helicase domain-containing protein |
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| Protein accession | YP_734298 |
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| Protein GI | 113970505 |
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| COG category | [J] Translation, ribosomal structure and biogenesis
[K] Transcription
[L] Replication, recombination and repair |
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| COG ID | [COG0513] Superfamily II DNA and RNA helicases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.177474 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 26 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCATTCT CCCAACTTGG ATTACACAGC GCGCTTGTCA AAGCGGTGAC TGAACTGGGT
TACACGACCC CCACGCCGAT ACAGACAAAG GCCATACCCA GCATTTTAGC GGGCAAGAAT
GTGCTTGCTG CGGCGCAAAC GGGCACAGGT AAAACCGCCA GTTTTGTGCT GCCGCTGCTA
CACAGATTCG CCGATGCCCC CAAGATCCGC CCTAAGCGAG TGCGGGCCAT CATACTCACC
CCCACACGTG AGTTAGCGCT TCAGGTCGAA GAAAATATCA ACCAATACGC CAAGTATTTA
CCCTTAACGG CCATGGCGAT GTACGGTGGT GTCGACGCCG CGCCGCAAAA GAAACGACTG
ATTGAAGGCG TCGATTTACT GGTGGCCACG CCAGGGCGTT TGCTCGACAT GTATACCCAA
AGGGCCATCC GTTTCGATGA AGTTTCAGTA TTGGTGCTCG ACGAAGCCGA CCGCATGCTC
GATATGGGCT TTATCGAAGA TATTAATAGC ATCATAGAAA AGCTGCCCGA GCAGCGACAA
AATCTCTTAT TTTCAGCCAC CTTATCGAAA CAGGTGAAAG CGCTGGCAAA ATCCGCTATT
CCGGACGCCA TCGAAATTGA AATCAGCCGT AAGAGCGCGG CGTCGACTCA TATTGACCAA
TGGTTGACCA CGGTCGATAA AGATAAAAAG TCAGCGTTGC TGAGTCATTT GATCCAAGAA
AATAACTGGT CACAGGCATT AATTTTTATC CAAACCAAAC ACGGCGCCGC CAAATTGGTT
AGCCAGTTAG AAAAGCGTGG CATTGTTGCA GAGGCTTTTC ACAGTGGCCG CAGCCAAGCG
GTGCGTGAGC AACTGCTTAT CGATTTTAAA GCGGGTAAAG TCTCCTTCTT GGTCGCTACG
GGTGTGGCCT CACGCGGTAT TGATATCGAT GCCTTAGCAC GGGTGATCAA CTACGACTTG
CCCGATGAAG CCGACGACTA TATTCACCGT ATTGGCCGTA CAGGACGTGC GGGTAACCAA
GGTGAAGCGA TTTCGTTTGT CTCTAAGGAT GATTTCAGAA ACCTATGCGC CATCGAACGT
CGCTTAGGTC ATGTTATCGT ACGCAGGGAG ATAGCAGGCT TTGAGCCGAA AAAAATCGTG
CCGATTTCCA TACTCGATTT TGTGCCTAAA TCGGCATCGA CAACAGAGCG TAAACCCCAT
AAACCGACCG ACACAAGTGC TCAACCCCGC CCCTATTCGA GCGGCAAGCC GGGCACCTTT
GAGGCGACAC AAGCCAAGAA GCATCGTAGT GCCAAAGCGA CTCCTGCGCC TAAAGCCCCA
AAGACAGGGA CGGATAGTCG CTCAGGTACT CGTTCAGATA GCCGCCCTAC GAGCCCACTG
CAAGGTAATC CATGGCAAAA CAGCATCAAG CCGCAGGGTG ATACCGAACC CCAGGCAAAT
CCTTGGCACA AAAGCACTAA GTGA
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| Protein sequence | MPFSQLGLHS ALVKAVTELG YTTPTPIQTK AIPSILAGKN VLAAAQTGTG KTASFVLPLL
HRFADAPKIR PKRVRAIILT PTRELALQVE ENINQYAKYL PLTAMAMYGG VDAAPQKKRL
IEGVDLLVAT PGRLLDMYTQ RAIRFDEVSV LVLDEADRML DMGFIEDINS IIEKLPEQRQ
NLLFSATLSK QVKALAKSAI PDAIEIEISR KSAASTHIDQ WLTTVDKDKK SALLSHLIQE
NNWSQALIFI QTKHGAAKLV SQLEKRGIVA EAFHSGRSQA VREQLLIDFK AGKVSFLVAT
GVASRGIDID ALARVINYDL PDEADDYIHR IGRTGRAGNQ GEAISFVSKD DFRNLCAIER
RLGHVIVRRE IAGFEPKKIV PISILDFVPK SASTTERKPH KPTDTSAQPR PYSSGKPGTF
EATQAKKHRS AKATPAPKAP KTGTDSRSGT RSDSRPTSPL QGNPWQNSIK PQGDTEPQAN
PWHKSTK
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