Gene Shewmr4_2152 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewmr4_2152 
Symbol 
ID4252725 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. MR-4 
KingdomBacteria 
Replicon accessionNC_008321 
Strand
Start bp2576719 
End bp2577072 
Gene Length354 bp 
Protein Length117 aa 
Translation table11 
GC content41% 
IMG OID638118776 
Producttetraheme cytochrome c 
Protein accessionYP_734282 
Protein GI113970489 
COG category 
COG ID 
TIGRFAM ID[TIGR01905] doubled CXXCH domain 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.738839 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value0.0741814 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAATGT TAAATATTGT ACTCGCACTG GTCTTAGGTG GCTTGGTGAG TCTGTCTGCT 
CACGCCGTAG AACAACGTCC TTGGCATAAA GAAGTCATTG GCAAAGATTG TAAGGTATGT
CACGACAATG GCATCAAGCA ATTTCCTTCG GATCAAGCTT GTTTGCAGTG TCACGATGTG
GATGATTTAG CAAAGAAAAC GGCTCGTAGT GAAGAGGATA AGTGGCAGAA TCCACATAAT
AATCTGCATT ATGGTAAAGA TCTGCCGTGT CAGGAATGTC ACGGTGAACA TAAGTCTAAG
CAACCTTTAT GCAGTAATTG CCACACCTTT AAGTTTGACA AGTATAAAAA GTAA
 
Protein sequence
MKMLNIVLAL VLGGLVSLSA HAVEQRPWHK EVIGKDCKVC HDNGIKQFPS DQACLQCHDV 
DDLAKKTARS EEDKWQNPHN NLHYGKDLPC QECHGEHKSK QPLCSNCHTF KFDKYKK