Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewmr4_2147 |
Symbol | |
ID | 4252720 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. MR-4 |
Kingdom | Bacteria |
Replicon accession | NC_008321 |
Strand | - |
Start bp | 2569315 |
End bp | 2571327 |
Gene Length | 2013 bp |
Protein Length | 670 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 638118771 |
Product | sodium/hydrogen exchanger |
Protein accession | YP_734277 |
Protein GI | 113970484 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG0025] NhaP-type Na+/H+ and K+/H+ antiporters |
TIGRFAM ID | [TIGR01131] ATP synthase subunit 6 (eukaryotes),also subunit A (prokaryotes) |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.251145 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 20 |
Fosmid unclonability p-value | 0.368531 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGTTGAAA AAATCACTGG GATGTTAGCA CTGATTGGAG TGCTTTCGTT ATTTTGTCAA TGGGTGGGTT GGAAGCTTAG GTTACCTGCA ATTTTACCCT TATTACTCTG TGGTTTATTG TTAGGCCCAG CATTTGGGGT ACTCAATCCC GATGCGATAT TTGGGGATTT GCTGTTTCCC ATCATTTCTC TCGGTGTTGC CGTTATCCTG TTTGAGGGCG CATTAACCCT CAATTTTAAA GAGATTAAAG ATCATGGCCG CATGGTGACT CACTTAGTGA GCATCGGCAT GGTGATCACT TGGGGTTGTA TCAGTGTCGC GACCTTTTAT TTGCTCAATT TTAGCTGGGA GGTCGCACTG TTATTTGGCG CCCTTGTGGT GGTCACTGGT CCGACCGTGA TTGTCCCCAT GCTGCGCAGC GTACGGCCTA AGTCGCAACT GGCGAGTATT TTACGCTGGG AAGGGATTGT GATTGACCCA ATCGGCGCAC TCCTTGCAGT ATTAGTGTTT GAATATATTA CGGTATCAGG CGATCCCACT AGCCATGTGC TCTTTGCATT GGGCTCCATG CTGACACTGG GTTTAGGTTT AGGTGCGGTG TCGGGCTACT TAATTGGTCA AGTGATCCGC CGTAATCTAT TGCCCCATTA TTTACGTAAT ACCGCAGTAT TAACCCTTAT GCTGGGGATT TTCGTCGGCT CCAACCTACT ACAGGAAGAG TCGGGATTAC TCACTGTGAC TGTGATGGGG ATTTGGCTGG CAAATATGCG CGGTGTGGAT ATTGCTGAAA TCCTTGAGTT TAAAGAAACG CTGACAGTAC TGCTTATCTC CGCACTATTC ATCCTGTTAG CCGCAAGACT CGATTCGAAT GCCATGATGG ATTTAGGTTG GGGCGGTGTT GGTGTACTCG CCGTGACCAT GCTTATCGCG CGGCCACTCA GTATTTGGGT GTCAGGCATA GGGACGTCAC TCTCAAGAGC CGATAAGTGG TTCCTATGTT GGATTGCCCC GCGGGGGATT GTGGCGGCGG CCGTATCTTC CTTATTCGCC ATTAAGTTAG AAGCCACCAA TGTGCAGGGC GCCGATGCCA TCGTGCCCTT AGTATTTTTA ATCATTATCG GCACTGTCGT TATCCAAAGT TTAACCGCGG GCCGCTGGGC GAAATACCTT GGAGTAACCT CGGGTTCTGC CCAAGGCCTA CTTATCTTTG GTGCTTCAAA GTTTTCCCGC GAGCTGGCAA AAATCTTAAA GGCGAAGGAT GTCAAAGTAC TGCTAGCCGA TAGCAACTGG GATAATATTC GCCTCGCGCG GATGGACAAT ATTCCGGTCT ATTTTGGTAA TCCAGCCTCG GAACATGCTG AAACCTATAT GGATTTAACT GGGATTGGTC GAGTGCTGAT CATGTCGCCT TATAAGCAGT TGAACCCACT GGTGACCTTT TATTTTCAAG ATGTTTTAGG CTCTAAAAAG GTCTTTGGTC TTAACAATAC CGAGCAAGGC AGCGCGCGTC ATCAATTGTC TGAGTCTTAC AAACAGCGGT TATGTTTGTT TGGTGATGCG GTGTCCTACG CCAAAATTGC CAGCCAAATG GCGAAGGGGG CGCAGCTTAA AGTCACTAAC TTAACTGAAA ACTTTACCTT CGAGCATTTC CGTAAGCGTT ACGGTGAAAC CGCGCTGCCG CTCGTTTATC TAACCAAAGA GGGCAAAGTG GTAATTGTTT CAGGCAATGA GACTCAATTC CCCAATGGCA TTGAGTTAAT TAGTTTATTG CCCGTTGAGG CGCTTGAAGA AGCCAAAATC CAACAGGCGA TTGCCGAGCA AGAGGCAATC GCTGCACAGG CAAAAGCGGC GGAAGAAGCG GCCCTTGCGA AAGCCAAGGC CGAGGCGGAA GCAGAAGCTG AGCGCCAACG GCTAGAGCAG GAAGAACAAA TGAAGGCGTC TGAACAATCG CAACCCGAGA CAGGCTCACA AGAAGCCATA GCAACCTCGG ATGAATCGCT CGCTAAGGGA TAG
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Protein sequence | MVEKITGMLA LIGVLSLFCQ WVGWKLRLPA ILPLLLCGLL LGPAFGVLNP DAIFGDLLFP IISLGVAVIL FEGALTLNFK EIKDHGRMVT HLVSIGMVIT WGCISVATFY LLNFSWEVAL LFGALVVVTG PTVIVPMLRS VRPKSQLASI LRWEGIVIDP IGALLAVLVF EYITVSGDPT SHVLFALGSM LTLGLGLGAV SGYLIGQVIR RNLLPHYLRN TAVLTLMLGI FVGSNLLQEE SGLLTVTVMG IWLANMRGVD IAEILEFKET LTVLLISALF ILLAARLDSN AMMDLGWGGV GVLAVTMLIA RPLSIWVSGI GTSLSRADKW FLCWIAPRGI VAAAVSSLFA IKLEATNVQG ADAIVPLVFL IIIGTVVIQS LTAGRWAKYL GVTSGSAQGL LIFGASKFSR ELAKILKAKD VKVLLADSNW DNIRLARMDN IPVYFGNPAS EHAETYMDLT GIGRVLIMSP YKQLNPLVTF YFQDVLGSKK VFGLNNTEQG SARHQLSESY KQRLCLFGDA VSYAKIASQM AKGAQLKVTN LTENFTFEHF RKRYGETALP LVYLTKEGKV VIVSGNETQF PNGIELISLL PVEALEEAKI QQAIAEQEAI AAQAKAAEEA ALAKAKAEAE AEAERQRLEQ EEQMKASEQS QPETGSQEAI ATSDESLAKG
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