| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr4_2145 |
|---|
| Symbol | |
|---|
| ID | 4252718 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella sp. MR-4 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008321 |
|---|
| Strand | - |
|---|
| Start bp | 2565726 |
|---|
| End bp | 2566505 |
|---|
| Gene Length | 780 bp |
|---|
| Protein Length | 259 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 50% |
|---|
| IMG OID | 638118769 |
|---|
| Product | glutamine amidotransferase, class-II |
|---|
| Protein accession | YP_734275 |
|---|
| Protein GI | 113970482 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0121] Predicted glutamine amidotransferase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 7 |
|---|
| Plasmid unclonability p-value | 0.00200131 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 23 |
|---|
| Fosmid unclonability p-value | 0.701842 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTGTGAGT TACTGGCGAT GAGCGCCAAT GTGCCGACCG ATATTGTGTT TAGTTTTACT
GGGTTAGCAC AGCGTGGTGG CGTCACTGGG CCCCATGTCG ACGGTTGGGG GATCACTTTC
TATGAGGGCC GTGGCAGCCG TACGTTTAAA GATGCTTGCC CGAGTAGTGA GTCGCACATT
GCAAAATTAA TCAAATCCTA TCCGATTAAA AGCGAGGTGG TGATAAGCCA TATTCGTCAG
GCCAATCGCG GCTGTGTTTC CCTTGAAAAT ACCCACCCAT TCACCCGTGA GTTGTGGGGG
CGTTATTGGA CCTATGCCCA TAATGGTCAG TTAAGCGACT ATCAGGCAAA GTTTCAGGTG
TCACGCTATC AGAGTGTCGG CGATACCGAC AGCGAGCTGG CTTTTTGCTG GATATTGGAG
CAAGTCGTGG CCAAGTTTGG TGACCGCCGC CCAGAGGATA TGCAAGCGGT GTTTCGATTT
GTGGCTACGC TTGCCGAACA AATCCGCGCC CTTGGGGTGT TTAATATGAT CCTCAGCGAT
GGCGAATACT TGATGAGCTA TTGCAGTAAT AATCTGTGTT ACATCACCCG CAGGGCACCG
TTTGGCAAGG CAAAATTAAT TGATACCGAT GTCGTGATTG ATTTTGATAA AGAAACCACG
CCACACGATG TCGTGACTGT AATTGCGACT CGGCCGCTCA CCGAAAACGA AGACTGGCAG
GTGATGCAGC CTGGCAATTG GAAGTTGTTC CGCTTAGGTG AGCTGCTTAT CGACTTGTAA
|
|---|
| Protein sequence | MCELLAMSAN VPTDIVFSFT GLAQRGGVTG PHVDGWGITF YEGRGSRTFK DACPSSESHI
AKLIKSYPIK SEVVISHIRQ ANRGCVSLEN THPFTRELWG RYWTYAHNGQ LSDYQAKFQV
SRYQSVGDTD SELAFCWILE QVVAKFGDRR PEDMQAVFRF VATLAEQIRA LGVFNMILSD
GEYLMSYCSN NLCYITRRAP FGKAKLIDTD VVIDFDKETT PHDVVTVIAT RPLTENEDWQ
VMQPGNWKLF RLGELLIDL
|
|---|
| |