Gene Shewmr4_2144 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewmr4_2144 
Symbol 
ID4252717 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. MR-4 
KingdomBacteria 
Replicon accessionNC_008321 
Strand
Start bp2564748 
End bp2565560 
Gene Length813 bp 
Protein Length270 aa 
Translation table11 
GC content47% 
IMG OID638118768 
Producthypothetical protein 
Protein accessionYP_734274 
Protein GI113970481 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.177211 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value0.876176 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGCGCACAA TTCCAACGTT ATTCGTGAGT CTCGCACTCA CCCACAGCGT ATTTGCGATG 
GCGGCGCCAA CGCCTTTAAC GCCTCAAACT GCTGAATATC AAGTTAATTA TGGTGATATT
GAGTTGGGTA AGGCCAAGTA TCAACTGCCC GCCATGGAGG ATGGGATCTA CAAATATCGC
TTCGACAGCG ATCTTAGCCT GTTATTACTG ACCGATGTGC GCCATGTGCT GAGTGAGTTT
GCCCAGGATG GCAATCAATT ATTACCCCTG CGCTATTTGC ATGAGCGCCA AGGTGTCGGC
CCGAATTTTA TCGAGCAAAC CGCCTTTGCC AAGGGGCAAG GGATGATCCA CACCCGTTAT
AAGGATGAAA AAGGTAAATT CCCCTTCGAA GGCGATATTT TCGATCCGTT AATGGTGCAG
TTGCAGTTTC GTCTCGATAT CAGCGCTGGT AAAGAAGTGC TTGATTATAA GATGATTAAA
TCTAACGAAC TCGATGAATA CAAATTCCAT GTGATTGGTA AGGAACGGAT GACAATTGAG
AGTGGCAGTT ACGATACAGT CAAAATTGAG GTCGTGCGGG ACAATAATAA ACGCCAAACC
TTCTTCTGGA TGGCGCCGGA TTTAGCCTAC CTCCCCGTTC GTCTAACGCA CTTTGAAAAA
GGCAGTAAAC AGCTGGATAT CAAACTGCTG AATTATCATT TCGACGATGT GCCAGTCGAA
GTCGTGCCCG CAGCCGTTGA AGCCGCTACC GTTGAAACAG ATGTTGCGAC GGAGCAGAAA
GTGCCTAAAC TCCTCGGCAC AGGCGCGAAT TAA
 
Protein sequence
MRTIPTLFVS LALTHSVFAM AAPTPLTPQT AEYQVNYGDI ELGKAKYQLP AMEDGIYKYR 
FDSDLSLLLL TDVRHVLSEF AQDGNQLLPL RYLHERQGVG PNFIEQTAFA KGQGMIHTRY
KDEKGKFPFE GDIFDPLMVQ LQFRLDISAG KEVLDYKMIK SNELDEYKFH VIGKERMTIE
SGSYDTVKIE VVRDNNKRQT FFWMAPDLAY LPVRLTHFEK GSKQLDIKLL NYHFDDVPVE
VVPAAVEAAT VETDVATEQK VPKLLGTGAN