Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewmr4_2144 |
Symbol | |
ID | 4252717 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. MR-4 |
Kingdom | Bacteria |
Replicon accession | NC_008321 |
Strand | + |
Start bp | 2564748 |
End bp | 2565560 |
Gene Length | 813 bp |
Protein Length | 270 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 638118768 |
Product | hypothetical protein |
Protein accession | YP_734274 |
Protein GI | 113970481 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.177211 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 24 |
Fosmid unclonability p-value | 0.876176 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | TTGCGCACAA TTCCAACGTT ATTCGTGAGT CTCGCACTCA CCCACAGCGT ATTTGCGATG GCGGCGCCAA CGCCTTTAAC GCCTCAAACT GCTGAATATC AAGTTAATTA TGGTGATATT GAGTTGGGTA AGGCCAAGTA TCAACTGCCC GCCATGGAGG ATGGGATCTA CAAATATCGC TTCGACAGCG ATCTTAGCCT GTTATTACTG ACCGATGTGC GCCATGTGCT GAGTGAGTTT GCCCAGGATG GCAATCAATT ATTACCCCTG CGCTATTTGC ATGAGCGCCA AGGTGTCGGC CCGAATTTTA TCGAGCAAAC CGCCTTTGCC AAGGGGCAAG GGATGATCCA CACCCGTTAT AAGGATGAAA AAGGTAAATT CCCCTTCGAA GGCGATATTT TCGATCCGTT AATGGTGCAG TTGCAGTTTC GTCTCGATAT CAGCGCTGGT AAAGAAGTGC TTGATTATAA GATGATTAAA TCTAACGAAC TCGATGAATA CAAATTCCAT GTGATTGGTA AGGAACGGAT GACAATTGAG AGTGGCAGTT ACGATACAGT CAAAATTGAG GTCGTGCGGG ACAATAATAA ACGCCAAACC TTCTTCTGGA TGGCGCCGGA TTTAGCCTAC CTCCCCGTTC GTCTAACGCA CTTTGAAAAA GGCAGTAAAC AGCTGGATAT CAAACTGCTG AATTATCATT TCGACGATGT GCCAGTCGAA GTCGTGCCCG CAGCCGTTGA AGCCGCTACC GTTGAAACAG ATGTTGCGAC GGAGCAGAAA GTGCCTAAAC TCCTCGGCAC AGGCGCGAAT TAA
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Protein sequence | MRTIPTLFVS LALTHSVFAM AAPTPLTPQT AEYQVNYGDI ELGKAKYQLP AMEDGIYKYR FDSDLSLLLL TDVRHVLSEF AQDGNQLLPL RYLHERQGVG PNFIEQTAFA KGQGMIHTRY KDEKGKFPFE GDIFDPLMVQ LQFRLDISAG KEVLDYKMIK SNELDEYKFH VIGKERMTIE SGSYDTVKIE VVRDNNKRQT FFWMAPDLAY LPVRLTHFEK GSKQLDIKLL NYHFDDVPVE VVPAAVEAAT VETDVATEQK VPKLLGTGAN
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