Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewmr4_2139 |
Symbol | |
ID | 4252712 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. MR-4 |
Kingdom | Bacteria |
Replicon accession | NC_008321 |
Strand | - |
Start bp | 2558779 |
End bp | 2560632 |
Gene Length | 1854 bp |
Protein Length | 617 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 638118763 |
Product | hypothetical protein |
Protein accession | YP_734269 |
Protein GI | 113970476 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0210] Superfamily I DNA and RNA helicases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 29 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGAAGCGAT TCGTATCACC GTCGATTGAC CAATTGGAGA AGCTGCGCCA GCCGCTTACC GAAGGCGAAC GACTGGTTTT CAATCTCTTC AATGAGAAGT TGGCGCCAGA ATGGGAAATC TACATCCAGC CTCACCTAAA TGGGTTAAGG CCAGACTTTG TCCTTCTGAA CCCCAGTGTT GGGATTGCTG TGTTTGAGGT TAAAGACTGG AACCTCGATG CAATGCAGTA TTGGACTGAG AAGAGAGATG GGAAGGCTCC AAAGCTATGT GCAAGCGATG GTCGCAAGTC GTTCTCAATT CAAAATCAAA ATCCTATTGA GAAGGTATTT AGATACAAGC AGGAGATACA TAATCTTTAC TGTCCAAGGC TGGATGGGCA GGCAGGTTTT GCCACTATCA CTGCTGGCGC GATATTTCCG TTTGCCAGAC AAGATCAAAT AAGTGACTTA TTGAGGCCTT GCTTGGCGCA CAGAGGGATG CTGGATTGGC CTCAATACAA TCCGATCTCT GGCGCCGAAG CAATTTCAGA AAACAGAATT GACCTAGTGT TTCCAGAAGG CCGTCGATCT TCGTCGAAGT TTATGACTGA AGACCAAGCT AACGATATGA GGAACTGGCT TGTTGAGCCA GACTATGCCG CCACTCAGCG AAAGCCTATT GAGCTGGATG TCGCACAAAG GGGTTATGTA ACTTCGCGCA CTCAATCTGG CTACAGGCGA ATCAAAGGGC CGGCAGGCTC TGGCAAATCC CTAATTCTTG CGGCTAGAGC GGCGCAGTTG CTTGGTGAGG GTAAAGAAGT CCTTGTTGTT ACCTTCAACA TCACATTGCT CCACTACCTG ATGGATGTGG CTGTGAGATG GCCAAATTCT CACGGCCGGA CAAGGCAGGG AATAACTTGG CTGAATTTCC ATTCGTGGTG TAAACGGGTC TGCGAAGAAT CTGACCGTGA AGATGAATAT CGCAACCTTT GGAAAGGCGG CGAAGGTCAA CAAGATCATG TCCTAAGCAC ACAACTTCCT GCGCTCATCG CAAGCTGTAT AGATAAAGAT TCTGAAGAAT CTATACAACG ATACGATGCC GTGCTCGTAG ATGAAGGACA AGATTTTCTT CCTACTTGGT GGAACGTACT GAGAAAAGTG TGTCGAACAG GTGGAGAGAT GTTGCTCGTC GCTGATGCGA CACAGGACAT CTACGGAACT GCTCGATCGT GGACTGACGA GGCCATGACT GGCGCGGGAT TTCCTGGCGG TAGATGGGCG GAGCTTCAGA CGTGCTACAG ACTTCCGCCT ACAGCGATGG AAATCGCACG AAATTTTGCT GATCAATACT TGCCAAGTGA TACGGTCGAT TTGCCAAACG GCCCTCAGGG CGAGCTTGAC CTTTATCCAT GCTTACTGCT ATGGGTGCAA GTATCTGAAG GAAATGAGGT GCAGGTCTGT GCAGAAGAAA TTCTGAAAAT GGCACCGAGA GCCGAAAATG ACATTCTAGC GATTACGGAC ATTACATTTT TAACAGGAAC TCAAAAGATG GGGGCAGCCG TGGTGAGTGT TCTTGAGTCA AAAGGAGTTA ATGCAGTCCA CACATACAGC TCCGATAAAA AAGAATCGCG CAGGAAGAAG ATGGGGTTCT ATATGGGGGA CGCCAGAGTC AAAGCAACAA CGCTGCATAG CTTCAAAGGC TGGGAGTCCC GTGCAATTGT TCTCTTTGTA GAGGACAATC AAGACTACGC ATTGATCTAT GCAGGCCTAA CTCGGCTAAA ACGGCATGAA GTGGGTAGCT ATTTAACAGT TGTTTCGCGT GCAAGCTCCC TTGCTGAATT CGGAAAATCG TGGCCGAACT ATGAAAAAAT GTAA
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Protein sequence | MKRFVSPSID QLEKLRQPLT EGERLVFNLF NEKLAPEWEI YIQPHLNGLR PDFVLLNPSV GIAVFEVKDW NLDAMQYWTE KRDGKAPKLC ASDGRKSFSI QNQNPIEKVF RYKQEIHNLY CPRLDGQAGF ATITAGAIFP FARQDQISDL LRPCLAHRGM LDWPQYNPIS GAEAISENRI DLVFPEGRRS SSKFMTEDQA NDMRNWLVEP DYAATQRKPI ELDVAQRGYV TSRTQSGYRR IKGPAGSGKS LILAARAAQL LGEGKEVLVV TFNITLLHYL MDVAVRWPNS HGRTRQGITW LNFHSWCKRV CEESDREDEY RNLWKGGEGQ QDHVLSTQLP ALIASCIDKD SEESIQRYDA VLVDEGQDFL PTWWNVLRKV CRTGGEMLLV ADATQDIYGT ARSWTDEAMT GAGFPGGRWA ELQTCYRLPP TAMEIARNFA DQYLPSDTVD LPNGPQGELD LYPCLLLWVQ VSEGNEVQVC AEEILKMAPR AENDILAITD ITFLTGTQKM GAAVVSVLES KGVNAVHTYS SDKKESRRKK MGFYMGDARV KATTLHSFKG WESRAIVLFV EDNQDYALIY AGLTRLKRHE VGSYLTVVSR ASSLAEFGKS WPNYEKM
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