Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewmr4_2123 |
Symbol | |
ID | 4252696 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. MR-4 |
Kingdom | Bacteria |
Replicon accession | NC_008321 |
Strand | - |
Start bp | 2533569 |
End bp | 2535632 |
Gene Length | 2064 bp |
Protein Length | 687 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 638118747 |
Product | peptidase S9 prolyl oligopeptidase |
Protein accession | YP_734253 |
Protein GI | 113970460 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG1506] Dipeptidyl aminopeptidases/acylaminoacyl-peptidases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 3 |
Plasmid unclonability p-value | 0.000494152 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 37 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGATATAA CAATGAAAAT AGCTCCTCTC CTATTGGCGC TTGGCGCGGC TGGTTTGGCC TGCTCAGCCC ACGCGGCCGA TCCTAAGCCT TTTACTGTGC AACAGCTGGT TAAACTCAAC AAATTGCATT CAGCCGCGGT GTCCCACGAC GGCACAAAAT TGGTCTACGG CCTGAAAACC GTTAATGACA AGGGAGAGGC GAGCTCAGAT TTATATATTC TCGATTTGAC GCAAGCGGAC GCGAAACCGA TGCAGATCAC TTCTGCAGCG GGTACTGAGC ACGATGTCAG CTTCGCAAAC GATGACAAAT CGATTTATTT CCTCGCCAGC CGCAGTGGTT CAAGCCAACT GTTCCAACTG CCATTAACGG GCGGTGAAGC GCAGCAAGTT TCTGATCTGC CATTGGATAT TGATGGTTAC AAACTCTCTA ACGATGGTAA GCAAATCGTG CTCAGCATGC GTGTTTTCCC CGAGTGTAAA GACTTAGCTT GTTCAAAAGA CAAATTTAAG GCCGAAGAAG AGCGTAAATC GACGGGCCGT GAATACAAGC AGTTGATGGT GCGTCACTGG GATACCTGGG AAGATCATGC CCGTAACCAC TTATTTGTGG GTGCCCTTAA TGGCGAGAAG CTGACCAAAG TGGTGGACAT CACCCAAGGT TTAGACACAG AAACCCCACC TAAGCCATTC TCAGGCATGG AAGAAGTGTC CTTCACTCCT GATGGCAAAT ATGTGGTGTA CAGCGCCAAA GCGCCAAGCA AAGATCAAGC TTGGACGACA AACTACGATC TGTGGCAGGT GAGTGTAAAC GGTGGAAAAG CCACTAACTT AACCGCCGAT AACATCGCTT GGGACGCCCA GCCAATATTC TCAAGCGATG GTCGCTATAT GGCGTACCTC GCGATGACTA AACCCGGCTT CGAAGCTGAC CGTTACCGCA TTATGCTGCG TGATACTAGC ACTGGACAGT CGAAGGAAGT GGCACCGCTG TGGGACAGAA GCCCAAGCTC GCTGATGTTT GCACCAGACA ACCGTACTCT GTATGTGACG GCTCAAGACA TTGGTCAAGT GTCTATTTTC AAAGTGAATA CTCAGTTTGG TGATGTGCAG TCTGTCTACA GCGACGGCAG CAATAGCCTG ATTGCGATCG CCGACGATCA ACTGATCTTC GACAGCAAAA CCTTAGTTGA GCCGGGCGAT CTGTACCGCA TCAACACCGA CGGCCAAGGC CTGAAACGTC TGACTGAAGT TAACAAAGAC AAACTGGCCG AAATCAAATT CGGTGAATTC CAACAATTTA GCTTTAAGGG TTGGAACAAC GAAGATGTTT ACGGTTACTG GATCAAACCT GCCAACTACC AAGAAGGCAA AAAGTATCCG ATTGCATATC TAGTCCACGG TGGTCCGCAG GGGTCATTTG GTAACGCCTT CAGTGGTCGT TGGAACGCCC AGTTATGGGC TGGCGCGGGT TATGGCGTTG TGATGGTGGA CTTCCACGGT TCAACTGGTT ACGGCCAAGC CTTTACCGAT TCTATCAGCC AAGATTGGGG TGGTAAGCCA TTAGAAGACT TACAAAAAGG TCTGGCAGCG GTGAGCCAAC AACAAAAATG GCTCGATCCA CAAAATGCCT GTGCATTGGG CGGCTCTTAC GGCGGCTACA TGATGAACTG GATCCAAGGC AACTGGAACG ATGGCTTTAA GTGCCTCGTT AACCACGCGG GTCTGTTCGA TATGCGCTCT ATGTACTATG TGACCGAAGA AGTATGGTTC CCAGAGCATG AGTTTGGTGG CACTTACTCA GATAACAAAG CCTTATATGA GAAGTTTAAC CCAGTAAACT ATGTGGAAAA CTGGAAAACG CCAATGTTGG TTATCCATGG CGAGAAGGAC TTCCGTGTGC CTTATGGTCA AGGTTTAGCC TCATTTAGCT ATATGCAACG CAAGGGAATT CCATCAGAGC TGCTGATTTT CCCTGATGAA AACCACTGGA TCTTAAAGCC TGAAAACCTC GAACAATGGT ACGCGAACGT GTTCCGTTGG ATGGACAGCT GGACGAAAAA GTAA
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Protein sequence | MDITMKIAPL LLALGAAGLA CSAHAADPKP FTVQQLVKLN KLHSAAVSHD GTKLVYGLKT VNDKGEASSD LYILDLTQAD AKPMQITSAA GTEHDVSFAN DDKSIYFLAS RSGSSQLFQL PLTGGEAQQV SDLPLDIDGY KLSNDGKQIV LSMRVFPECK DLACSKDKFK AEEERKSTGR EYKQLMVRHW DTWEDHARNH LFVGALNGEK LTKVVDITQG LDTETPPKPF SGMEEVSFTP DGKYVVYSAK APSKDQAWTT NYDLWQVSVN GGKATNLTAD NIAWDAQPIF SSDGRYMAYL AMTKPGFEAD RYRIMLRDTS TGQSKEVAPL WDRSPSSLMF APDNRTLYVT AQDIGQVSIF KVNTQFGDVQ SVYSDGSNSL IAIADDQLIF DSKTLVEPGD LYRINTDGQG LKRLTEVNKD KLAEIKFGEF QQFSFKGWNN EDVYGYWIKP ANYQEGKKYP IAYLVHGGPQ GSFGNAFSGR WNAQLWAGAG YGVVMVDFHG STGYGQAFTD SISQDWGGKP LEDLQKGLAA VSQQQKWLDP QNACALGGSY GGYMMNWIQG NWNDGFKCLV NHAGLFDMRS MYYVTEEVWF PEHEFGGTYS DNKALYEKFN PVNYVENWKT PMLVIHGEKD FRVPYGQGLA SFSYMQRKGI PSELLIFPDE NHWILKPENL EQWYANVFRW MDSWTKK
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