| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr4_2118 |
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| Symbol | |
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| ID | 4252691 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. MR-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008321 |
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| Strand | - |
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| Start bp | 2526860 |
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| End bp | 2528332 |
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| Gene Length | 1473 bp |
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| Protein Length | 490 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 638118742 |
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| Product | RNA-directed DNA polymerase |
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| Protein accession | YP_734248 |
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| Protein GI | 113970455 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG3344] Retron-type reverse transcriptase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 33 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATGGTTT CTCATGAAAT CAGTGCCTCC CTCGACAGCA ACCCGTGGCA ATCCATTGAC
TGGAAGGCCG CTGAGTCGCT TGTATTAAAG CTTCAGATGC GTATTGCAAA GGCAACAAGA
GAAGGTAAAC AAGGCAAGGT GAAAGCCCTG CAATGGGTAT TGACTCACTC ACGCTCCGCA
AAACTCCTTG CGGTTAAGCG TGTTTCACAA AACAAAGGCA GTAATACACC TGGAATAGAT
GGCGTCATCT GGAACACAGA TGCTCGCCGT ATTGCAGCGG TTAAGCAACT GAAACGGAAA
GCGTATCAAG CCAAACCTCT CAAGCGTATC TACATCCCCA AGAAAAATGG CAAACTCAGA
CCACTCGGTA TCCCCTGCAT GATAGATAGG GCGCAACAAG CGCTGCATTT ACTTGCTTTA
GAGCCGATAT CAGAGACTGT CGCAGACCCA AATAGCTATG GCTTTCGGCC TCATCGAAGC
ACTGCTGATG CAATCGCTCA GTGCTTCCTA TGTCTGAGCC AAAGGTATTC TAGCGAATGG
GTTCTTGAGG GTGATATCAA AGCGTGTTTT GACAAGATTG GCCACCAATG GCTTATCGAC
AACATAGCGC TAGACAAGAA AATGCTAAGA CAATGGCTGG AATGTGGCTT TATGGACAAA
GGGTTATTCT ACAGAACCGA TGAGGGAACA CCCCAAGGTG GGATCATCTC ACCGACATTG
ATGTTACTCA CCCTCTCAGG ACTGGAACAA CTCCTTAAAG CCACGGCCCG CCGTAAAGGC
TGCAACGTTA ACTTTATCGG ATATGCAGAC GATTTCGTCG TTACTGGATC TTCAAAGGAA
GTGCTAGTAA ACGAAATCAA ACCGCTGATT GCACGCTTCT TAGCAGAAAG AGGACTAACG
CTATCGGAAG AGAAAACCCA TGTCACTCAT ATCAATGATG GATTTGATTT TCTAGGTTTT
AATCTCAGGA AATACAAAGG GAAATTACTC ATCAAACCGA GTAAATCCAA TGCGCTGTCA
TTCTTAGGTA ACATGCGAAC ACTCATCAAA ACACACGGCA CGACATCAAC TAACGATCTC
ATCAGACTGA TGAATCCGAA GTTGCGCGGC TGGGCGAACT ATTATCGCCA TGTTGTAGCT
AAGCAAACTT TCGGCTATGT GAGTTACAAA CTATTCCAGA CACTATGGCA CTGGGCAGTG
AGACGTCATC CCACTAAAGG AAAGCGGTGG GTAGCGTTCA AATATTTCAT AAACCGCCAA
GGCCAATGGC AATTTCACGG TTGGAACAAA GTCGCTGATA TGGACTGTCA GTTTAACCTT
GTGCAAATCG CCCATACGCC GATAGTGCGA CATGTGAAAA TCAGAAGTGC GGCAACGCCT
TATGACCCCC AATTTTCTGA GTATTTTAGA AAGCTAAGGC GGGAGAAAGG AAGTCGTAAC
TCTTGGTTGG AACCCGTCCA AACTGCGTTG TAA
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| Protein sequence | MMVSHEISAS LDSNPWQSID WKAAESLVLK LQMRIAKATR EGKQGKVKAL QWVLTHSRSA
KLLAVKRVSQ NKGSNTPGID GVIWNTDARR IAAVKQLKRK AYQAKPLKRI YIPKKNGKLR
PLGIPCMIDR AQQALHLLAL EPISETVADP NSYGFRPHRS TADAIAQCFL CLSQRYSSEW
VLEGDIKACF DKIGHQWLID NIALDKKMLR QWLECGFMDK GLFYRTDEGT PQGGIISPTL
MLLTLSGLEQ LLKATARRKG CNVNFIGYAD DFVVTGSSKE VLVNEIKPLI ARFLAERGLT
LSEEKTHVTH INDGFDFLGF NLRKYKGKLL IKPSKSNALS FLGNMRTLIK THGTTSTNDL
IRLMNPKLRG WANYYRHVVA KQTFGYVSYK LFQTLWHWAV RRHPTKGKRW VAFKYFINRQ
GQWQFHGWNK VADMDCQFNL VQIAHTPIVR HVKIRSAATP YDPQFSEYFR KLRREKGSRN
SWLEPVQTAL
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