Gene Shewmr4_2105 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewmr4_2105 
Symbol 
ID4252678 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. MR-4 
KingdomBacteria 
Replicon accessionNC_008321 
Strand
Start bp2512038 
End bp2512499 
Gene Length462 bp 
Protein Length153 aa 
Translation table11 
GC content51% 
IMG OID638118729 
ProductMarR family transcriptional regulator 
Protein accessionYP_734235 
Protein GI113970442 
COG category[K] Transcription 
COG ID[COG1846] Transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.81628 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACTGTTG CACACCCGCA TGATGCTTTA TCAGCCGCGT CCGCCCATTC TACGGATCAG 
GCCCTGAACC ATGTGATTAT TGAGTTTTAT GAAAAACTAT CATCGTGGGA GCATGCTATT
GTGCGCGATA AGGGTTTTAG CTTGTCGCAG GTACACACGA TAGAGTTGTT GGGGGTGCAC
GGCGCGATGC GCATGAAGGA ACTGGCCGAC AAAATCGGCG TGACCACAGG TACGCTCACC
GTACAAATCG ATAAAATGGT CGAGTCCCAG TGGGTGATGC GCCGTCCCCA TGAGAGTGAC
AGACGTTCGA TTCTGGTTGA GCTCACCGAG AAAGGTCAGG CGCTGTTCCT CGAGCATGAT
GCACTGCATT TGCAATTAAC GACCGATCTC ACGGCTAAGA TGAGTGCAGA GGAGCGAAGT
TTACTGCTGA GTCTGTTGAC GCGGATGAAT CAAGAGTTTT AA
 
Protein sequence
MTVAHPHDAL SAASAHSTDQ ALNHVIIEFY EKLSSWEHAI VRDKGFSLSQ VHTIELLGVH 
GAMRMKELAD KIGVTTGTLT VQIDKMVESQ WVMRRPHESD RRSILVELTE KGQALFLEHD
ALHLQLTTDL TAKMSAEERS LLLSLLTRMN QEF