| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr4_2099 |
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| Symbol | |
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| ID | 4252672 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. MR-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008321 |
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| Strand | - |
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| Start bp | 2502920 |
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| End bp | 2504503 |
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| Gene Length | 1584 bp |
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| Protein Length | 527 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 638118723 |
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| Product | EmrB/QacA family drug resistance transporter |
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| Protein accession | YP_734229 |
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| Protein GI | 113970436 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2814] Arabinose efflux permease |
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| TIGRFAM ID | [TIGR00711] drug resistance transporter, EmrB/QacA subfamily |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 0.710397 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGAGTCAGC AAGTAATCGC AGGGCAAGAC CATGCCCAAG CTGAGGGCGT GAATTCGAGC
GACGCTTTGC AAGCCGATAC TAAACCTAAG TCTGAGCAAC ACCTTGGGTT TATCACGCTT
TCGGTGATGC TGGCGACCAT TATGCAAGCG CTGGATACTA CGATTGCCAA CGTGGCCTTG
CCCCATATGC AGGGCAGCAT GGGGGCAACT CAGGATCAAA TCTCTTGGGT GTTAACCTCC
TATATTGTGG CCGCGGCGAT TTTTATGCCG CTGACGGGTT TTTTAACCGC AAGGCTTGGG
CGTAAACGGG TATTTATGTG GGCTGTGGTG GGCTTTACGA TTGCCTCTAT GCTCTGCGGC
GCGGCGCAAA ACCTCGAGCA AATTGTGTTA TTTCGCTTAT TGCAAGGGGT GTTTGGTGCC
AGCTTAGTGC CTTTATCCCA ATCGGTATTA CTCGACAGTT ACCCGCCAGA GCGCCATGGT
TCGGCCATGG CCCTTTGGGG AGTGGGTGTG ATGGTCGGGC CGATTTTGGG GCCATCCCTC
GGTGGTTGGT TAACTGAGTA TTACAACTGG CGCTGGGTGT TCTATATTAA TCTGCCTTTT
GGGCTATTGG CCTGGTTTGG TCTTGCCGCC TATGTGAAAG AAACGCCACT GGACCATAGC
CGTAAGTTCG ATTTACTCGG TTTTGCCATG TTGAGTCTGG CCATTGGCGC CTTGCAAATG
TTGCTCGATA GGGGAGAATC CCTCGATTGG TTTTCTAGTC GCGAAATTGT TATCGAAGCC
ATTATTGCTG GCATGGCGTT TTATTTGTTT GTGGCCCATA TCTTTACCCA TAAACATCCC
TTTATTGAGC CAGGGCTGTT TAAGGACAGA AACTTCAGTG TGGGGCTTAT CTTCATCTTT
ATCATTGGGA TTATTCTGCT GGCGACCATG GCCTTACTGC CGCCGTTTAT GCAGAACCTG
TTAGGTTATC CTGTGATTGA TGTGGGCTAC TTGCTGGCGC CAAGGGGCGT CGGCACTATG
ATCGCCATGA TGACTGTGGG TAAGCTCGCC GGCAAAGTGG ATGTGCGCTA CCAAATCTTT
TTAGGTTTGA TGCTCACTAT TTTGTCCCTA TGGGAGATGA CGGGTTTTAA CACCAATATT
ACCGGCTGGG ACATAGTGCG CACTGGGGTT ATCCAGGGCC TTGGCTTAGG GTTTATCTTT
GTACCGCTCT CGACCATTAC CTTTGCAACC TTAGCGGCGA AATACCGTAA TGAGGGGACT
GCGCTCTTTA GTCTGATGCG AAATATCGGC AGCAGCATAG GGATCTCTGT GGTGATCACC
TATCTTGCTC AGCACACACA GATGAATCAT GCGGTGTTTG CCGATTACAT TCATCCCTTT
AGTTTTGCGC TGCAACATGC TGTTGATGTT CATGCCGTTG ATTTATCGAC GACGCAGGGC
ATGGCATTAC TCAATGCCGA AGTGAATCGT CAGGCGGCTA CCTTGGCCTA TTTGCAGGAC
TTTAGATTAA TGATGTGGGT GACGTTATCC GCCGTGCCCT TAGTGTTTCT GCTTAAAGGC
GTGCATAAAA AACCAAAGCT TTAA
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| Protein sequence | MSQQVIAGQD HAQAEGVNSS DALQADTKPK SEQHLGFITL SVMLATIMQA LDTTIANVAL
PHMQGSMGAT QDQISWVLTS YIVAAAIFMP LTGFLTARLG RKRVFMWAVV GFTIASMLCG
AAQNLEQIVL FRLLQGVFGA SLVPLSQSVL LDSYPPERHG SAMALWGVGV MVGPILGPSL
GGWLTEYYNW RWVFYINLPF GLLAWFGLAA YVKETPLDHS RKFDLLGFAM LSLAIGALQM
LLDRGESLDW FSSREIVIEA IIAGMAFYLF VAHIFTHKHP FIEPGLFKDR NFSVGLIFIF
IIGIILLATM ALLPPFMQNL LGYPVIDVGY LLAPRGVGTM IAMMTVGKLA GKVDVRYQIF
LGLMLTILSL WEMTGFNTNI TGWDIVRTGV IQGLGLGFIF VPLSTITFAT LAAKYRNEGT
ALFSLMRNIG SSIGISVVIT YLAQHTQMNH AVFADYIHPF SFALQHAVDV HAVDLSTTQG
MALLNAEVNR QAATLAYLQD FRLMMWVTLS AVPLVFLLKG VHKKPKL
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