Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewmr4_2094 |
Symbol | |
ID | 4252667 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. MR-4 |
Kingdom | Bacteria |
Replicon accession | NC_008321 |
Strand | - |
Start bp | 2496313 |
End bp | 2496678 |
Gene Length | 366 bp |
Protein Length | 121 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 638118718 |
Product | response regulator receiver protein |
Protein accession | YP_734224 |
Protein GI | 113970431 |
COG category | [K] Transcription [T] Signal transduction mechanisms |
COG ID | [COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 24 |
Fosmid unclonability p-value | 0.911812 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGTAAAA AAATATTAAT TGTTGATGAC TCGGCCGCGA TCAGACAGAT GGTTGAGGCG ACGTTAAAGT CGGCAAATTA CCAAGTCGTG CTCGCCAAGG ATGGTCGTGA AGCCCTAGAT TTATGTGGTG GACAACGATT CGATTTTATT TTGACGGATC AAAATATGCC CCGTATGGAC GGTTTGACGC TCATTAAATC CCTTAGGGGC ATGTCGGCCT TTATGCGCAC TCCCATTGTT ATGCTAACCA CCGAAGCCGG AGAAGACATG AAGGCGCAAG GTCGAGCCGC TGGCGCAACG GGATGGATGG TCAAGCCCTT TGATCCGCAG AAGCTATTAG CTATCACAGC CAAAGTTCTG GGCTAA
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Protein sequence | MSKKILIVDD SAAIRQMVEA TLKSANYQVV LAKDGREALD LCGGQRFDFI LTDQNMPRMD GLTLIKSLRG MSAFMRTPIV MLTTEAGEDM KAQGRAAGAT GWMVKPFDPQ KLLAITAKVL G
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