| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr4_2089 |
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| Symbol | |
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| ID | 4252662 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. MR-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008321 |
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| Strand | - |
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| Start bp | 2490129 |
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| End bp | 2490749 |
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| Gene Length | 621 bp |
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| Protein Length | 206 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 638118713 |
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| Product | chemoreceptor glutamine deamidase CheD |
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| Protein accession | YP_734219 |
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| Protein GI | 113970426 |
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| COG category | [N] Cell motility
[T] Signal transduction mechanisms |
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| COG ID | [COG1871] Chemotaxis protein; stimulates methylation of MCP proteins |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 29 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 25 |
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| Fosmid unclonability p-value | 0.995215 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGCCAAAGC CGAATATTGA ATACCCTGTT ATTGAGCCGA ATCGCTATTT TGATCATCAT
TTTGGCTGTG ATGCGGTTAA AATTCTGCCG GGGGAGTTTT ACGCCACACG GGACCAAACC
ATGATAGTCA CAGTGTTAGG CTCATGTGTG TCCGTTTGCC TCTCCGATCC TGAATTAAAA
ATTGGGGGGA TGAACCATTT TCTATTGCCG AGTGACAACG GCAATTGTTC GGGAATATTA
GCAGATTCAG CTCGTTACGG TGTGTACGCC ATGGAGTTAT TGATCAACGA GCTGCTCAAA
CTCGGTGCTA GGCGCCGTGC CTTGGTCGCT AAAGTGTTTG GTGGTGGAAA TATGCTTAAC
GGGATCACCA CCCATAATAT CGGCGAGCGT AATTCGGAGT TTGTGCTCGA ATATTTGCAG
CTTGAGCAAA TCCCGATACT GGCCGCAGAC TTACTCGATT ATTATCCTCG AAAGGTATAT
TTTTTTCCGG CGACAGGTTT AGTAAAAGTT AGAAAAATCA GAACAATGCA TAATAGCACC
ATTATGGACA GGGAAAGTGA GTATCGCCTA AGGATCAGGA ATTTGCCGAG CGGCGGTGAT
GTGGAACTCT TTGGTGACTA A
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| Protein sequence | MPKPNIEYPV IEPNRYFDHH FGCDAVKILP GEFYATRDQT MIVTVLGSCV SVCLSDPELK
IGGMNHFLLP SDNGNCSGIL ADSARYGVYA MELLINELLK LGARRRALVA KVFGGGNMLN
GITTHNIGER NSEFVLEYLQ LEQIPILAAD LLDYYPRKVY FFPATGLVKV RKIRTMHNST
IMDRESEYRL RIRNLPSGGD VELFGD
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