Gene Shewmr4_2079 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewmr4_2079 
Symbol 
ID4252652 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. MR-4 
KingdomBacteria 
Replicon accessionNC_008321 
Strand
Start bp2474399 
End bp2475277 
Gene Length879 bp 
Protein Length292 aa 
Translation table11 
GC content51% 
IMG OID638118703 
Producthypothetical protein 
Protein accessionYP_734209 
Protein GI113970416 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCCTTGTA TCGTTGAAGG ACTGGGCTAT AAATGCTGTT TTGTTTCACT TAGAATAACC 
GTCCTCGACC TTTCACTTGC CGTTTTAAGG GATCGCGTGC TAATCCATCA GCAATACCAT
CGTCATGGCC CCGATTATCG CTTTGGGGAG CAAATGACCT TTCTCGATGT GAAGCAAACC
TTTGGTTTTA GCCATGTACG TGTGGGACGT TGGGTCACGC GCGAGGAGTC ATTGATTGCC
GCGAATTTGG TATTTGATTC GCTGGCAGAT CTTGCCTTTA TCCTCATTTT ACCGCCGTTG
ACCTTAGGAC TAAGGCAAAC CTTAAGCCTT GCCTTTGGCC ACGGTGGGCA AAAGGGTGTG
CAGGCACACT ATGCGCCAGG GGCGCGAGAA TTGGCATTAG CGAAAAATGC GGGTGCTGGG
GCGCTGGCCC ATGAGTTTTG GCATGCGTTT GACCACTATG TTGCCCCTAA GGCGTTTTCG
CGCGCCACGG GACGTTTTAA GTGCGCCAGC GATCTCTGGC TTGCGGATCA GCCGCTTATC
GAGCATCCCC TTAATCACCG TTTAGCTGAG ATCTTTCGGG TTACCTTGCT CTCCGAGGAC
AATTTGGAGC CAAGTGATTA CGTTCGCCGC GCAATTGCCT TAGATAAGCG TTATGGTGCG
CAGTATTTTG CTAAACCGAC GGAAATGATG GCGAGGGCCT TTGAGGCCTG CATCGAATCC
TATCAAGGGA TCCAAAATCC CTATTTAGTC TCTGGCACGC GCTATTCAGC GCTGGCAAAG
GAAGGGGCCT ACCCCGATGA GCCACATAGA CAACGTATCT TTAATGCCTT GATTGCCTAC
TTTGAGCCAT TAGGCATGGC GTTAGGGAAA ACCGGATAA
 
Protein sequence
MPCIVEGLGY KCCFVSLRIT VLDLSLAVLR DRVLIHQQYH RHGPDYRFGE QMTFLDVKQT 
FGFSHVRVGR WVTREESLIA ANLVFDSLAD LAFILILPPL TLGLRQTLSL AFGHGGQKGV
QAHYAPGARE LALAKNAGAG ALAHEFWHAF DHYVAPKAFS RATGRFKCAS DLWLADQPLI
EHPLNHRLAE IFRVTLLSED NLEPSDYVRR AIALDKRYGA QYFAKPTEMM ARAFEACIES
YQGIQNPYLV SGTRYSALAK EGAYPDEPHR QRIFNALIAY FEPLGMALGK TG