| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr4_2077 |
|---|
| Symbol | |
|---|
| ID | 4252650 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella sp. MR-4 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008321 |
|---|
| Strand | + |
|---|
| Start bp | 2472356 |
|---|
| End bp | 2473177 |
|---|
| Gene Length | 822 bp |
|---|
| Protein Length | 273 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 46% |
|---|
| IMG OID | 638118701 |
|---|
| Product | beta-lactamase domain-containing protein |
|---|
| Protein accession | YP_734207 |
|---|
| Protein GI | 113970414 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0491] Zn-dependent hydrolases, including glyoxylases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 25 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 25 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTATAAAG CATTAGCTCC CCTCGTCTTT GTTACATGCT ATTTTGCAGC CAACGCCGAT
ACCATCACTA TTGAAAAAGT CTCCGATCAA CTACTGCAGT TGAAAGGTGT GGACTACGGA
ACCAATATCG GCGTGCTATC AACGAGCGAA GGCTTAGTGT TTATCGACCC TATGCCAGGG
GATGAACACT TAGATACCTT AAGTCGTACC ATCCAATCCC TCTATGGCAA ACCCGTTAAA
TTTATCTTGA ATACCCATGA ACACACCGAT CATACCGGCG GTAATCAATA TTTTATCCAA
CAAGGTGCCA GCTTAGCGCC AACACAAAGC CTAGCGTCAG CGCAGTCATT CATGGCAGAG
ATAGTGACCA TTCAAGTTTC ATCCCATTCT GCTGCCGACA GGATCTATTT TCACCCGCAA
AGTAACAGCC TATTTGTCGG CGATATTGTC GATAACAGCT GGCACCCCAC ATTCTATGCC
GGTGGAATAC GCGGCTTTAA TGCGGCAATC AACCACATTT TACGCCTCGG CGATGAAGAC
AGCCTTATCG TGCCGGGGCA TGGTAAGCCA AGTAATAAAG CATCACTTCG CAGCTTTCAG
CAAAACACCA ACGACTGGGT ACACTTGATT GAAACCCAGC TAGATGCGGG TAACAGTGTG
GAGGACATCA TTCAACATCC ACAGGTCGCG ACCCTTATTG CACGCTTTAA TCAGGAGGAT
AAATCCCCTT TTCTACCGCC AAAGGCTTTA AGGAAATTTA TCGAAAGAAC CATTAGCGTG
ATTGAAAAAG CGCGTCTTAG CACGCCAACC AATAGCAACT AA
|
|---|
| Protein sequence | MYKALAPLVF VTCYFAANAD TITIEKVSDQ LLQLKGVDYG TNIGVLSTSE GLVFIDPMPG
DEHLDTLSRT IQSLYGKPVK FILNTHEHTD HTGGNQYFIQ QGASLAPTQS LASAQSFMAE
IVTIQVSSHS AADRIYFHPQ SNSLFVGDIV DNSWHPTFYA GGIRGFNAAI NHILRLGDED
SLIVPGHGKP SNKASLRSFQ QNTNDWVHLI ETQLDAGNSV EDIIQHPQVA TLIARFNQED
KSPFLPPKAL RKFIERTISV IEKARLSTPT NSN
|
|---|
| |