| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr4_2072 |
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| Symbol | |
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| ID | 4252645 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. MR-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008321 |
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| Strand | - |
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| Start bp | 2465553 |
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| End bp | 2466470 |
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| Gene Length | 918 bp |
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| Protein Length | 305 aa |
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| Translation table | 11 |
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| GC content | 37% |
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| IMG OID | 638118696 |
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| Product | LysR family transcriptional regulator |
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| Protein accession | YP_734202 |
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| Protein GI | 113970409 |
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| COG category | [K] Transcription |
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| COG ID | [COG0583] Transcriptional regulator |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.0341772 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 0.872543 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGGCTAA ACTACAACCT GCTTAAACCA TTGAGTTTTT TATTGGAAAC ACAGAGTATT
AACGACACCG CCACTCAGCT AAAGACGAGT TCGTCGGCCG TAAGTCGTAC GCTGAAAACG
TTAAGACATA TTTTTGAAGA TGAATTGCTA ACAAGAAAAA ATGGCAAAAT GGAACTTACG
ACTAAAGCTA TCGCATTACG TGAAAAAGTA AGTCGTATCA TCGAGGAAAT TGAAAGCCTA
ACGGAGAATG AATCATTCAA CCCTCTCATG CTCACCAGCA ATATTACCAT AGCGATGAAT
GCATCTATTG CTCAATGGTT TGCTCCTTTA CTAATTGACC ATTTGGCAAA AAATGCTCCA
GGTATAAAAT TGACAATTGA AGACTGGAGT GATGCAACAC CTCAACATAT TTGTGAACAT
AGAGTTGATT ATGGGATCCA TTATTTTCCA TTAAATTTAT CGAAGAACTT AGTGCAAAAA
TGCGGTGAGC TAGACCATTT TGTGGTTGTG TGTCGTACAC AACATCCTCT AGCGACACAA
AATATTAAGC TAGATCACTT TAGTCAATTT CCTTTAGCTG TACATGTGAT GAAGTATTGG
AATGAAGGCC AAGATCATTT GTCTCGATAT CTCAAGAAAC TTGGGGTCGA GACAAATGTG
GCACTGCGTA CGACTCATTT AAGCGTGTTG TTAAAGGCGC TTGAAAACAA TGATTACTTA
TTTCCTTGCT CAATTAACTT AGCGAAAACC TTGGATACAA AATTTACGTA TATCAGTTCT
GATTCGTTAT CATTTGTTCC TTTGCAGCAA CGAAATTTTG GTTTTCTGTA TGATAAAACC
AGGAGTAATG ATGAATTAAT TCATTGGTTT CACGGTGAAA TATCGGAATT GATGCGTAAC
CAAGTTAGAA ATCATTAA
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| Protein sequence | MRLNYNLLKP LSFLLETQSI NDTATQLKTS SSAVSRTLKT LRHIFEDELL TRKNGKMELT
TKAIALREKV SRIIEEIESL TENESFNPLM LTSNITIAMN ASIAQWFAPL LIDHLAKNAP
GIKLTIEDWS DATPQHICEH RVDYGIHYFP LNLSKNLVQK CGELDHFVVV CRTQHPLATQ
NIKLDHFSQF PLAVHVMKYW NEGQDHLSRY LKKLGVETNV ALRTTHLSVL LKALENNDYL
FPCSINLAKT LDTKFTYISS DSLSFVPLQQ RNFGFLYDKT RSNDELIHWF HGEISELMRN
QVRNH
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