| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr4_2070 |
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| Symbol | |
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| ID | 4252643 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. MR-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008321 |
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| Strand | + |
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| Start bp | 2464335 |
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| End bp | 2464976 |
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| Gene Length | 642 bp |
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| Protein Length | 213 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 638118694 |
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| Product | DNA-(apurinic or apyrimidinic site) lyase / endonuclease III |
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| Protein accession | YP_734200 |
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| Protein GI | 113970407 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0177] Predicted EndoIII-related endonuclease |
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| TIGRFAM ID | [TIGR01083] endonuclease III |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.027671 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 0.855553 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAATCAAG AAAAACGCAT CCAAATCCTC ACCCGCCTTC GCGAAAACAA TCCCAAACCC
GAAACCGAGC TGAATTTCTC CAGTCCCTTT GAATTACTGG TGGCGGTGAC TTTATCGGCG
CAGGCGACCG ATGTGAGCGT AAATAAGGCG ACTGATAAAC TGTTTCCAGT CGCCAATACC
GCCCACAGTA TTTATGCCTT AGGCGTGGAG GGATTAAAGG AATATATCAA GACCATTGGC
CTGTATAACA ACAAGGCCAT CAATGTGATT AAAGCCTGTG AGATCTTGAT TGAAAAATAC
AACGGCGAAG TCCCAGAAGA CAGAGAGGCG CTAGAGTCGC TTCCAGGCGT AGGTCGTAAA
ACCGCTAACG TGGTGCTCAA TACCGCCTTT GGCTGGCCAA CCATCGCCGT CGACACCCAT
ATCTTTCGCA TGGCAAACCG CACTAAATTC GCCCCTGGTA AAAACGTGGT CGAAGTCGAG
GAGCGCATGT TAAAGGTTGT TCCCGCCGAA TTTAAAGTCG ATGTGCATCA CTGGTTTATT
CTGCATGGCC GCTATACCTG TCTGGCTCGC AAACCCCGCT GTGGCAGTTG CATTATTGAG
GACCTTTGCG AATTTAAAGA AAAGGTCTAT CCCGAAGAAT AA
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| Protein sequence | MNQEKRIQIL TRLRENNPKP ETELNFSSPF ELLVAVTLSA QATDVSVNKA TDKLFPVANT
AHSIYALGVE GLKEYIKTIG LYNNKAINVI KACEILIEKY NGEVPEDREA LESLPGVGRK
TANVVLNTAF GWPTIAVDTH IFRMANRTKF APGKNVVEVE ERMLKVVPAE FKVDVHHWFI
LHGRYTCLAR KPRCGSCIIE DLCEFKEKVY PEE
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