Gene Shewmr4_2065 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewmr4_2065 
Symbol 
ID4252638 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. MR-4 
KingdomBacteria 
Replicon accessionNC_008321 
Strand
Start bp2458741 
End bp2459322 
Gene Length582 bp 
Protein Length193 aa 
Translation table11 
GC content50% 
IMG OID638118689 
Productelectron transport complex protein RnfB 
Protein accessionYP_734195 
Protein GI113970402 
COG category[C] Energy production and conversion 
COG ID[COG2878] Predicted NADH:ubiquinone oxidoreductase, subunit RnfB 
TIGRFAM ID[TIGR01944] electron transport complex, RnfABCDGE type, B subunit 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0000000637231 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCCACCA TGTTAATTGC CGTTATTTTA TTAACCCTAT TGGCATTGTT CTTTGGGGTA 
TTACTCGGAT TTGCCGCCTT AAAATTTAAG GTTGAAGGTA ATCCCATCGT CGATGAACTC
GAAGCGATTC TGCCACAAAC CCAATGCGGT CAATGTGGTT ATCCCGGCTG CCGCCCCTAC
GCTGAAGCGA TTGCCAATGG CGATAAAGTC AACAAGTGCC CGCCTGGCGG CACCGCGACC
ATGGAAAAGC TCGCCAGCTT AATGGGTGTA GAGCCAGAGC CGCTCAATGC AGAGGCCCAA
TCCCAAGTCA AAAAAGTCGC CTACATTCGC GAAGATGAAT GTATTGGCTG CACTAAATGT
ATTCAGGCCT GTCCTGTTGA CGCCATTATT GGTGCGGGCA AACTCATGCA TACCGTGCTT
ACGGCAGACT GCACAGGTTG CGATCTCTGT GTCGAGCCCT GCCCCGTTGA CTGTATCGAT
ATGCTCCCTG TGGGCCAAAA TCTGAAAAAC TGGAACTGGC GCTTAAATGC CATTCCCGTG
ACTCTTATCC AAGAGACCCC GCACGAAGAA AAGAGAGGAT AA
 
Protein sequence
MSTMLIAVIL LTLLALFFGV LLGFAALKFK VEGNPIVDEL EAILPQTQCG QCGYPGCRPY 
AEAIANGDKV NKCPPGGTAT MEKLASLMGV EPEPLNAEAQ SQVKKVAYIR EDECIGCTKC
IQACPVDAII GAGKLMHTVL TADCTGCDLC VEPCPVDCID MLPVGQNLKN WNWRLNAIPV
TLIQETPHEE KRG