| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr4_2064 |
|---|
| Symbol | |
|---|
| ID | 4252637 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella sp. MR-4 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008321 |
|---|
| Strand | + |
|---|
| Start bp | 2458162 |
|---|
| End bp | 2458740 |
|---|
| Gene Length | 579 bp |
|---|
| Protein Length | 192 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 47% |
|---|
| IMG OID | 638118688 |
|---|
| Product | Na(+)-translocating NADH-quinone reductase subunit E |
|---|
| Protein accession | YP_734194 |
|---|
| Protein GI | 113970401 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG4657] Predicted NADH:ubiquinone oxidoreductase, subunit RnfA |
|---|
| TIGRFAM ID | [TIGR01943] electron transport complex, RnfABCDGE type, A subunit |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 1 |
|---|
| Plasmid unclonability p-value | 0.000000052503 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 28 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGTGAAT ATCTCCTGTT GTTGATCAGC ACAGTGCTGG TTAACAATTT CGTTTTAGTG
AAATTCTTAG GTTTATGTCC ATTTATGGGG GTCTCCAGCA AGTTGGAGTC CGCTATCGGC
ATGTCTATGG CCACGACCTT TGTGTTGACC TTAGCGTCAA TCCTCAGTTA CCTCGTCAAC
CAATATCTGT TATTGCCCTT TGACTTAGGT TACCTGCGTA CCATGAGCTT TATTCTGGTG
ATTGCCGTGG TGGTGCAATT TACTGAGATG GTGGTGCAAA AAACCAGTGC GGCTTTACAC
CGCGCCCTCG GTATCTATCT GCCGCTCATC ACCACTAACT GCGCCGTACT CGGGGTTGCC
CTGTTAAACG TGAACGAAAA ACACGATTTT ATTCAATCTG CTATCTATGG TTTTGGTGCA
GCGGTGGGTT TTTCCTTAGT GTTAATTCTG TTTTCCGCGA TGCGTGAACG TTTAGCTGCG
GCCGACGTGC CTATGCCTTT CAAAGGTGGC GCGATTGCCA TGATCACCGC AGGGCTGATG
TCCTTGGCCT TTATGGGATT CACAGGATTG GTTAAATAG
|
|---|
| Protein sequence | MSEYLLLLIS TVLVNNFVLV KFLGLCPFMG VSSKLESAIG MSMATTFVLT LASILSYLVN
QYLLLPFDLG YLRTMSFILV IAVVVQFTEM VVQKTSAALH RALGIYLPLI TTNCAVLGVA
LLNVNEKHDF IQSAIYGFGA AVGFSLVLIL FSAMRERLAA ADVPMPFKGG AIAMITAGLM
SLAFMGFTGL VK
|
|---|
| |