Gene Shewmr4_2057 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewmr4_2057 
Symbol 
ID4252630 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. MR-4 
KingdomBacteria 
Replicon accessionNC_008321 
Strand
Start bp2448317 
End bp2448805 
Gene Length489 bp 
Protein Length162 aa 
Translation table11 
GC content52% 
IMG OID638118673 
Producthypothetical protein 
Protein accessionYP_734187 
Protein GI113970394 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00202341 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value0.852274 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGAATCG ATGTTCCTTT AATCAATGAA GCCCAAATTG GCTCCCGCTT AAATGCGGCA 
ATCGAACACA ACAGGCGAGG AGAGTTCGCC CTGTTGCTGT CGCTATTGTC TGCAGACGCG
AGGGACATGG CGCAGTTTCA ATGGCAAAAA GAGCTCGATA ATGCAGAAAA ATTACAACGT
CAGTTCGAGT TACCCCCAAA GCAAGCACTT GTGGCGGATT TATCGACGGA TAACAAGGTT
ACCGACAATA GTGCTGTTTT TGTCGAGCAA GGGGCGAGGG CGTTTCAATT GCAACAGGCG
CTGCGCCCTG AAGCGTTAGT GATCCGCGGT GCTGAGCCTA TCGCGATGGC CGAAGCCTTA
AGCAATTGCG ATCTCACCAC ACGTCTGCGC CAACGTGGCC AGTTGCCATC CCCGAAAATG
GACGTCATGC ATTTTGCCGA TCAACTGGCG ATTCAACGGA ACTTAGTGCC GTTATTGGCC
AGCGCCTAA
 
Protein sequence
MRIDVPLINE AQIGSRLNAA IEHNRRGEFA LLLSLLSADA RDMAQFQWQK ELDNAEKLQR 
QFELPPKQAL VADLSTDNKV TDNSAVFVEQ GARAFQLQQA LRPEALVIRG AEPIAMAEAL
SNCDLTTRLR QRGQLPSPKM DVMHFADQLA IQRNLVPLLA SA