| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr4_2054 |
|---|
| Symbol | |
|---|
| ID | 4252627 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella sp. MR-4 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008321 |
|---|
| Strand | + |
|---|
| Start bp | 2444842 |
|---|
| End bp | 2445336 |
|---|
| Gene Length | 495 bp |
|---|
| Protein Length | 164 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 48% |
|---|
| IMG OID | 638118670 |
|---|
| Product | SecC motif-containing protein |
|---|
| Protein accession | YP_734184 |
|---|
| Protein GI | 113970391 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG3012] Uncharacterized protein conserved in bacteria |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 0.134044 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 21 |
|---|
| Fosmid unclonability p-value | 0.507231 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACACACG ACAAAAACTG CCCTTGCGGC AGCCAGAAAT CCTACCAAGA CTGCTGCCAA
GCACTGCATC TAGGGCTCGA TTCAGGAGCA CAACTGGCGA CAAGTCCTGA GCAATTAATG
CGCTCTCGCT ACTGCGCTTT TGTGTTGAAA AATTTTGATT ACATTATCAA AACACACCAT
GCAGCTTACC TCGATGGCTT AACCCTTGAG CAGCTCCAAC AAGGTCCACA TCCCGAATGG
TTAGGGCTCG ATGTATTATC CGCCAATGAC ACTACCCAGC CCGATGGCAG CAAGTTCGGT
ACTGTAACTT TCAAAGCCTG GTATAAGATG AATGGCGAGA TTGATGCCAT TTACGAGCGC
TCAGAGTTTA TCTTCGAGCA AGGTCGTTGG TTTTACACTA AAGGCCATCA AATGCATGCC
AAATTACCGG GGCGCAATGA TCCCTGCGTC TGCCACAGCG GTAAGAAGTT TAAGCAGTGC
TGCATGAAGG GTTAA
|
|---|
| Protein sequence | MTHDKNCPCG SQKSYQDCCQ ALHLGLDSGA QLATSPEQLM RSRYCAFVLK NFDYIIKTHH
AAYLDGLTLE QLQQGPHPEW LGLDVLSAND TTQPDGSKFG TVTFKAWYKM NGEIDAIYER
SEFIFEQGRW FYTKGHQMHA KLPGRNDPCV CHSGKKFKQC CMKG
|
|---|
| |