Gene Shewmr4_2053 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewmr4_2053 
Symbol 
ID4252626 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. MR-4 
KingdomBacteria 
Replicon accessionNC_008321 
Strand
Start bp2444236 
End bp2444814 
Gene Length579 bp 
Protein Length192 aa 
Translation table11 
GC content45% 
IMG OID638118669 
Producthypothetical protein 
Protein accessionYP_734183 
Protein GI113970390 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.253437 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value0.51249 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGATTTT TGCTGCTAGC CCTGATATGC CTATTGTCGC TTCCAAGTTT TGCTACTCCC 
GCAAAAGCCA AAACAACCAT GACAACCGAT CAGCTGATCA ATGCTAATTA TCCGCTGTTC
ACTAAAGCAT TTACTGAGCT TGCCCCCGAA GTCACCGCCG AGATTTATGC GAAAGATGCA
AGCTATCTCT CTGAAAGCCA AAGTAAAGAG ATCTATTATG GCCGTGAGAG CATTGTTGCT
ATATACCAAC GTTTTTTCGA TAAAATCCGC AATAAAAAGG CCCGTATCGA TATCGATTTC
CGGGTACTCA ACCGTAAGCT ATCCGGCAAC AGCGCGTTCG ACACTGGCTA TTATTTAGTG
CGTTTTTACC CCGCAGAAGA AACTGGCGAA CCTGTGAGTG AATTTGCTGG CAAATTTGTG
ATTGGCACCC AAAAAGACTC TCAGCAGCGC TGGAACGTCA CACTGGATAT GAATAACCGT
GCCGAACCCA GTTTCTATTT GAATGCCAAA CCTGTACCCA ATCTTTACTA TGGCCGCCAG
TTCCCACCGT TACCGGACAG CCAAAAGAAA AAGCAGTAA
 
Protein sequence
MRFLLLALIC LLSLPSFATP AKAKTTMTTD QLINANYPLF TKAFTELAPE VTAEIYAKDA 
SYLSESQSKE IYYGRESIVA IYQRFFDKIR NKKARIDIDF RVLNRKLSGN SAFDTGYYLV
RFYPAEETGE PVSEFAGKFV IGTQKDSQQR WNVTLDMNNR AEPSFYLNAK PVPNLYYGRQ
FPPLPDSQKK KQ