Gene Shewmr4_2052 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewmr4_2052 
Symbol 
ID4252625 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. MR-4 
KingdomBacteria 
Replicon accessionNC_008321 
Strand
Start bp2443513 
End bp2444103 
Gene Length591 bp 
Protein Length196 aa 
Translation table11 
GC content50% 
IMG OID638118668 
ProductSmr protein/MutS2 
Protein accessionYP_734182 
Protein GI113970389 
COG category[S] Function unknown 
COG ID[COG2840] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.418346 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value0.517442 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTAGATG ATGAATCAGC ACTGTTTTTT GAAGAAATGG CGGGGGTTGT GCCACTTAAG 
GGTGATGTGA AAGCGGTGAA TTTGCAGCCT AAGGCACTAA CGGAGGAGCA ACTTCAGCGC
CGTGATGCCT TGCAACGCGA GGCTTATTTA GCCTGCATGC CCTTGGATTT GAGTTTGATC
CCGATAATAG CGCCCGATGA TATTGCCAGT TTTAAGCGCG AAGGGGTACA AGGAGCGGTA
TTTAAGCGCT TAAGGCTGGG GCAGTACAGC GTTAAGATGG AATTAGATGT ACATGCCTAC
CGTTTAAGTC AGGCCCGTGA TGCGTTGCTC AATTATCTGT TAGCAGCGCA GGCCCATGGG
GAACGCTGCG TCATGCTTAT CCATGGTAAG GGCCATAACA GTAAACCCGT GGCTGGCCTG
CTGAAATCTG CCGTCTGCCA TTGGTTGTCT CAGCTTGATA TGGTGCTGGC CTATCATTCG
GCGAAAACCG AGCAGGGCGG CACGGGCGCC TTATATGTGA TGCTGACTAA ATCCGAACAG
CTTAAGATTG AGAATAAAGA GGCAAATCGC AAGGGAATGG GTTGGCGTTA A
 
Protein sequence
MLDDESALFF EEMAGVVPLK GDVKAVNLQP KALTEEQLQR RDALQREAYL ACMPLDLSLI 
PIIAPDDIAS FKREGVQGAV FKRLRLGQYS VKMELDVHAY RLSQARDALL NYLLAAQAHG
ERCVMLIHGK GHNSKPVAGL LKSAVCHWLS QLDMVLAYHS AKTEQGGTGA LYVMLTKSEQ
LKIENKEANR KGMGWR