| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr4_2051 |
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| Symbol | |
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| ID | 4252624 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. MR-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008321 |
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| Strand | + |
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| Start bp | 2441480 |
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| End bp | 2443342 |
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| Gene Length | 1863 bp |
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| Protein Length | 620 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 638118667 |
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| Product | peptidyl-dipeptidase A |
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| Protein accession | YP_734181 |
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| Protein GI | 113970388 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG1164] Oligoendopeptidase F |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.0115163 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 0.257719 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCTATTC TATTGAATCG TCCCACCACT CTTGCGCTCA CCATAGCGCT AACCTTAGGT
TTAACCGCCT GTAATGATGC CCAAAGCAAG GCCGAAACCA CTGCAGCGGC ACCAGCTGCA
ACTCAGGCCG CGCCCGATAA AGCTCAGGCC ATCGCCTTTA TTCAAGATGC TGAAGCCCAG
ATGGCGCAGC TCTCTATCGA AGCGAATCGC GCCGAATGGA TTTACAGTAA CTTCATCACC
GAAGATACCG CTGCACTCTC GGCCGCAGTG GGTGAAAAAG TCAGTGCCGC GTCGGTCAAA
TTCGCCACCG AAGCCGCCAA GTTCGCCAAT GTGGAGCTCG ATCCTGCCAA TGCGCGTAAA
CTGAATATTC TGCGCAGCGC ACTCGTGTTA CCTGCGCCGC TTGATCCCGC CAAAAATGCT
GAGCTGGCGC AAATCAGCTC CGAGCTCAAT GGACTCTATG GTAAAGGCAA ATACTGTTTC
GCCGATGGCA AGTGTATGAC CCAGCCAGAG CTGTCGAGCC TGATGGCGGA ATCGCGTGAC
CCCGCCAAAC TGCTTGAGGC ATGGAAAGGC TGGCGTGAAA TTGCAAAACC GATGCGCCCG
CTATTTCAAC GTGAAGTTGA ACTCGCCAAC GAAGGTGCAA AAGATCTAGG TTACGCTAAC
CTCTCTGAGT TATGGCGCAG CCAATACGAT ATGAAACCCG ATGAATTTTC ACAGGAATTA
GATCGTTTAT GGGGTCAAGT TAAGCCTCTC TACGAATCCC TGCATTGTTA TGTTCGCGGC
GAGCTGAATA ACGAATACGG TGACGCCATC GCGCCAAAAA CTGGCCCTAT TCCCGCACAC
TTACTTGGAA ATATGTGGGC GCAGCAATGG GGTAATGTGT ACGATCTCGT CGCCCCTGAC
GATGCCGATC CTGGCTACGA TGTGACAGAA TTACTCGAGC AAAAAGGCTA TGATGAACAC
AAGATGGTCA AACAGGCCGA AAGCTTTTTC ACCTCGTTAG GCTTTGCGCC GCTGCCAGAC
AGTTTTTGGA GCCGCTCTTT ATTCTTGCAA CCCAAGGATC GTGATGTCGT TTGTCATGCC
TCGGCGTGGG ATTTGGATAA CCTCGACGAT ATTCGCATCA AGATGTGTAT CCAGAAAACC
GCTGAAGACT TCACCGTTAT TCACCACGAA CTTGGGCACA ACTTCTATCA ACGTGCCTAT
AAACAGCAGC CTTTCCTGTT TAAAAACAGT GCCAATGATG GTTTCCATGA GGCCATTGGT
GACACGATCG CGCTATCAAT TACCCCAAGC TATCTAAAAC AGATTGGCTT GCTCGAAGAC
GTGCCCGATG CTTCCAAGGA TATTGGCTTA CTGCTGAAAC AAGCTCTGGA TAAAATCGCC
TTCCTACCCT TTGGTTTGAT GATTGACCAG TGGCGCTGGA AAGTCTTTAG CGGTGAAATC
ACTCCAGCAC AATATAACCA AGCCTGGTGG GAATTAAGAG AGAAATACCA AGGCGTTAAG
GCGCCGACAG ACCGCAGCGA AGCCGATTTT GACCCAGGTG CCAAGTACCA TGTGCCCGGT
AACGTGCCTT ATACGCGCTA CTTCCTCGCG CATATTCTAC AATTCCAGTT CCATAAGGCA
CTGTGTGATA CCGCTGGCGA TAAAGGGCCT GTGCACAGAT GCAGTATTTA TGGCAACCAA
GCTGCAGGGG AAAAGCTCAA TAAAATGTTA GAGCTGGGTG CAAGTCAACC TTGGCCAGTT
GCTTTAAAAG AAGTGACAGG TACTGAGGGG ATGGATGCCA AAGCCGTACT CGATTATTTT
GCGCCGCTTA AAACCTGGCT CGATGAGCAA AACACGGCGG CGAATCGTCA ATGTGGTTGG
TAA
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| Protein sequence | MAILLNRPTT LALTIALTLG LTACNDAQSK AETTAAAPAA TQAAPDKAQA IAFIQDAEAQ
MAQLSIEANR AEWIYSNFIT EDTAALSAAV GEKVSAASVK FATEAAKFAN VELDPANARK
LNILRSALVL PAPLDPAKNA ELAQISSELN GLYGKGKYCF ADGKCMTQPE LSSLMAESRD
PAKLLEAWKG WREIAKPMRP LFQREVELAN EGAKDLGYAN LSELWRSQYD MKPDEFSQEL
DRLWGQVKPL YESLHCYVRG ELNNEYGDAI APKTGPIPAH LLGNMWAQQW GNVYDLVAPD
DADPGYDVTE LLEQKGYDEH KMVKQAESFF TSLGFAPLPD SFWSRSLFLQ PKDRDVVCHA
SAWDLDNLDD IRIKMCIQKT AEDFTVIHHE LGHNFYQRAY KQQPFLFKNS ANDGFHEAIG
DTIALSITPS YLKQIGLLED VPDASKDIGL LLKQALDKIA FLPFGLMIDQ WRWKVFSGEI
TPAQYNQAWW ELREKYQGVK APTDRSEADF DPGAKYHVPG NVPYTRYFLA HILQFQFHKA
LCDTAGDKGP VHRCSIYGNQ AAGEKLNKML ELGASQPWPV ALKEVTGTEG MDAKAVLDYF
APLKTWLDEQ NTAANRQCGW
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