| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr4_2044 |
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| Symbol | |
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| ID | 4252617 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. MR-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008321 |
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| Strand | - |
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| Start bp | 2431378 |
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| End bp | 2433204 |
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| Gene Length | 1827 bp |
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| Protein Length | 608 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 638118660 |
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| Product | phosphogluconate dehydratase |
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| Protein accession | YP_734174 |
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| Protein GI | 113970381 |
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| COG category | [E] Amino acid transport and metabolism
[G] Carbohydrate transport and metabolism |
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| COG ID | [COG0129] Dihydroxyacid dehydratase/phosphogluconate dehydratase |
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| TIGRFAM ID | [TIGR01196] 6-phosphogluconate dehydratase |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.747422 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 0.183886 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCACTCAG TCGTTCAATC TGTTACCGAC AGAATTATTG CCCGTAGCAA AGCATCTCGT
GAAGCGTATT TAGCCGCGTT AAATGATGCT CGTAACCATG GCGTACACCG TAGCTCCTTA
AGCTGCGGTA ACTTAGCCCA CGGTTTTGCT GCTTGTAGTC CAGATGACAA AAATTCATTG
CGTCAACTGA CCAAAGCTAA CATCGGGATT ATTACCGCAT TCAACGATAT GTTGTCTGCA
CACCAACCCT ATGAAACCTA TCCTGAATTG CTGAAAAAAG CTTGTCAGGA AGTGGGCAGT
GTTGCACAGG TCGCAGGTGG TGTACCCGCG ATGTGTGACG GTGTGACTCA AGGTCAACCC
GGGATGGAAC TGAGCTTACT GAGTCGTGAA GTGATTGCCA TGGCGACGGC GGTGGGCTTA
TCCCACAACA TGTTTGATGG CGCCTTATTA CTGGGTATCT GCGACAAAAT CGTGCCGGGC
TTATTGATTG GCGCCTTAAG TTTTGGCCAT TTACCTATGC TGTTTGTGCC TGCAGGCCCA
ATGAAGTCGG GGATCCCAAA CAAGGAAAAA GCCCGTATTC GCCAGCAATT TGCCCAAGGT
AAAGTCGATA GAGCGCAGCT GCTTGAAGCC GAAGCGCAGT CTTACCACAG CGCTGGTACC
TGTACCTTCT ACGGTACGGC CAACTCGAAT CAGCTGATGC TTGAAGTGAT GGGGCTGCAA
TTGCCGGGTT CATCATTTGT AAATCCTGAC GATCCACTGC GTGAAGCCCT GAATAAAATG
GCGGCCAAGC AAGTGTGCCG CTTAACCGAA CTGGGTACTC AATACAGCCC AATCGGTGAA
GTGGTTAACG AGAAATCCGT CGTGAACGGC ATAGTGGCGC TACTGGCAAC GGGTGGTTCA
ACTAACTTAA CCATGCACAT TGTGGCGGCG GCGCGTGCGG CCGGCATTAT CGTTAACTGG
GATGATTTTT CTGAATTATC TGACGCGGTT CCATTATTGG CACGTGTTTA TCCAAACGGT
CATGCGGACA TTAACCACTT CCACGCCGCA GGCGGTATGG CTTTCCTTAT CAAGGAATTA
CTCGATGCGG GCCTACTGCA CGAGGATGTC AACACAGTTG CAGGTTTTGG TCTACGTCGT
TACACCCAAG AGCCCAAATT ACTCGATGGC GAGGTGCGCT GGGTAGATGG TCCAACCGTC
AGCCTAGATA CCGAAGTATT AACGTCTGTC GCTACGCCTT TCCAAAACAA CGGTGGCTTA
AAACTGCTTA AGGGCAACTT GGGTCGTGCT GTGATTAAAG TGTCAGCCGT GCAAGAAAAG
CACCGTGTAG TTGAAGCGCC AGCCGTGGTG ATTGACGATC AAAACAAACT GGATGCGCTG
TTTAAATCCG GCGCATTAGA CCGAGATTGT GTGGTGGTAG TAAAAGGTCA AGGGCCGAAA
GCGAACGGTA TGCCAGAGCT GCACAAGTTA ACGCCGCTGT TAGGCTCTTT GCAGGATAAA
GGCTTTAAAG TGGCACTGAT GACCGACGGT CGTATGTCAG GCGCATCGGG CAAAGTACCA
GCAGCGATTC ACTTAACGCC AGAGGCTATC GATGGCGGGC TGATTGCCAA AGTGCAAGAT
GGCGATCTTA TTCGTGTCGA CGCGCTGACC GGTGAGCTGA GCTTATTGGT CTCTGATGCC
GAACTTGCCG CGAGAACCGC TACAGAAATC GATTTACGCC ACTCACGCTA TGGAATGGGT
CGTGAGTTGT TTGGGGCACT GCGTTCAAAC TTAAGCAGTC CAGAAACCGG TGCGCGCAGT
ACCAGCGCCA TTGACGAACT TTATTAA
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| Protein sequence | MHSVVQSVTD RIIARSKASR EAYLAALNDA RNHGVHRSSL SCGNLAHGFA ACSPDDKNSL
RQLTKANIGI ITAFNDMLSA HQPYETYPEL LKKACQEVGS VAQVAGGVPA MCDGVTQGQP
GMELSLLSRE VIAMATAVGL SHNMFDGALL LGICDKIVPG LLIGALSFGH LPMLFVPAGP
MKSGIPNKEK ARIRQQFAQG KVDRAQLLEA EAQSYHSAGT CTFYGTANSN QLMLEVMGLQ
LPGSSFVNPD DPLREALNKM AAKQVCRLTE LGTQYSPIGE VVNEKSVVNG IVALLATGGS
TNLTMHIVAA ARAAGIIVNW DDFSELSDAV PLLARVYPNG HADINHFHAA GGMAFLIKEL
LDAGLLHEDV NTVAGFGLRR YTQEPKLLDG EVRWVDGPTV SLDTEVLTSV ATPFQNNGGL
KLLKGNLGRA VIKVSAVQEK HRVVEAPAVV IDDQNKLDAL FKSGALDRDC VVVVKGQGPK
ANGMPELHKL TPLLGSLQDK GFKVALMTDG RMSGASGKVP AAIHLTPEAI DGGLIAKVQD
GDLIRVDALT GELSLLVSDA ELAARTATEI DLRHSRYGMG RELFGALRSN LSSPETGARS
TSAIDELY
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