Gene Shewmr4_2036 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewmr4_2036 
Symbol 
ID4252609 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. MR-4 
KingdomBacteria 
Replicon accessionNC_008321 
Strand
Start bp2422380 
End bp2422907 
Gene Length528 bp 
Protein Length175 aa 
Translation table11 
GC content48% 
IMG OID638118652 
Productflavodoxin FldA 
Protein accessionYP_734166 
Protein GI113970373 
COG category[C] Energy production and conversion 
COG ID[COG0716] Flavodoxins 
TIGRFAM ID[TIGR01752] flavodoxin, long chain 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00000000119946 
Plasmid hitchhikingNo 
Plasmid clonabilityunclonable 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.000146054 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGGCAACTG TAGGTCTTTT TTTCGGTAGC GACACAGGCA ACACCGAAGC TGTCGCCAAG 
ATGATCCAGA AGAAACTGGG TAAGAAAATG GTTGAGGTGA AAGATATCGC CAAGAGCACC
AAAGAACAGA TCGCAGAATA CGACCTGCTG CTGTTCGGCA TCCCAACCTG GTATTACGGT
GAAGCACAGT GCGACTGGGA TGACTTTTTC CCTGAATTAG AACAGATTGA TTTTACAGAC
AAACTGGTTG CTATCTTCGG TTGTGGTGAC CAAGAAGACT ACGCAGAATA CTTCCTCGAT
GCCATGGGTA TGGTGGGCGA TATCGTTCAA GCTCGTGGCG GTATCATCAT CGGTCACTGG
CCAACGGCTG GTTATAACTT CGAAGCGTCA AAAGGCTTAG TCGATGATGA CCACTTCATC
GGTTTAGGGA TTGACGAAGA CCGTCAACCA GAGCTGACTG AAGAGCGTGT GGATGCTTGG
GTTAAGCAAA TCTACGAAGA AATGTGCTTA GCCGAGTTCG AAGACTAA
 
Protein sequence
MATVGLFFGS DTGNTEAVAK MIQKKLGKKM VEVKDIAKST KEQIAEYDLL LFGIPTWYYG 
EAQCDWDDFF PELEQIDFTD KLVAIFGCGD QEDYAEYFLD AMGMVGDIVQ ARGGIIIGHW
PTAGYNFEAS KGLVDDDHFI GLGIDEDRQP ELTEERVDAW VKQIYEEMCL AEFED