Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewmr4_2032 |
Symbol | |
ID | 4252605 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. MR-4 |
Kingdom | Bacteria |
Replicon accession | NC_008321 |
Strand | - |
Start bp | 2420094 |
End bp | 2420645 |
Gene Length | 552 bp |
Protein Length | 183 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | 638118648 |
Product | replication initiation regulator SeqA |
Protein accession | YP_734162 |
Protein GI | 113970369 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG3057] Negative regulator of replication initiationR |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.000189513 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 8 |
Fosmid unclonability p-value | 0.000121556 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGAAATACA TCGAAGTGGA TGAAGAGCTC TATCGTCATA TTGCCAGCAA AACGGAACGT ATTGGTGAGA GCGCCTCTGA CATTCTCCGT CGATTACTCG GCCTGTCCGT CGATGCGGTT GAACAGGCGC AGCCACAGGC CATTAGCCAA CCGAGTTTAG AGGCAGCGAC GCCTGAGCCA CAGATTGCGC CTCAGGTCGA AACCTTAGTC TCTGCGACCG ATTTCAATCA ATTGGTGGAT GAGCATAAGT TAGAGCAGCA AAAAGGCGCC GTGGGTCGTT TCTTATTTTT GCTTGAGAGT TTATATCAAC AGAGCCAAGC GCAATTCTCG CAAATTTTAC AGATCCAAGG TCGCGATCGA CTCTATTTTG CGCGCTCAAG GGAAGAGTTA CTCAAGGCCA GTGCTACCGC TAACCCCAAG GAAATCGGTA ACACCGGATT TTGGGTCACG ACCAACAATA ACACCGCCAA AAAACGGGCG ATTTTAGTCG AAGCCTTAAT GCAATTTGGC TGCGATGCCC AAATCGCCAA CGGCATTGCC GAACGCGTAT AA
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Protein sequence | MKYIEVDEEL YRHIASKTER IGESASDILR RLLGLSVDAV EQAQPQAISQ PSLEAATPEP QIAPQVETLV SATDFNQLVD EHKLEQQKGA VGRFLFLLES LYQQSQAQFS QILQIQGRDR LYFARSREEL LKASATANPK EIGNTGFWVT TNNNTAKKRA ILVEALMQFG CDAQIANGIA ERV
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