Gene Shewmr4_2032 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewmr4_2032 
Symbol 
ID4252605 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. MR-4 
KingdomBacteria 
Replicon accessionNC_008321 
Strand
Start bp2420094 
End bp2420645 
Gene Length552 bp 
Protein Length183 aa 
Translation table11 
GC content50% 
IMG OID638118648 
Productreplication initiation regulator SeqA 
Protein accessionYP_734162 
Protein GI113970369 
COG category[L] Replication, recombination and repair 
COG ID[COG3057] Negative regulator of replication initiationR 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000189513 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.000121556 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGAAATACA TCGAAGTGGA TGAAGAGCTC TATCGTCATA TTGCCAGCAA AACGGAACGT 
ATTGGTGAGA GCGCCTCTGA CATTCTCCGT CGATTACTCG GCCTGTCCGT CGATGCGGTT
GAACAGGCGC AGCCACAGGC CATTAGCCAA CCGAGTTTAG AGGCAGCGAC GCCTGAGCCA
CAGATTGCGC CTCAGGTCGA AACCTTAGTC TCTGCGACCG ATTTCAATCA ATTGGTGGAT
GAGCATAAGT TAGAGCAGCA AAAAGGCGCC GTGGGTCGTT TCTTATTTTT GCTTGAGAGT
TTATATCAAC AGAGCCAAGC GCAATTCTCG CAAATTTTAC AGATCCAAGG TCGCGATCGA
CTCTATTTTG CGCGCTCAAG GGAAGAGTTA CTCAAGGCCA GTGCTACCGC TAACCCCAAG
GAAATCGGTA ACACCGGATT TTGGGTCACG ACCAACAATA ACACCGCCAA AAAACGGGCG
ATTTTAGTCG AAGCCTTAAT GCAATTTGGC TGCGATGCCC AAATCGCCAA CGGCATTGCC
GAACGCGTAT AA
 
Protein sequence
MKYIEVDEEL YRHIASKTER IGESASDILR RLLGLSVDAV EQAQPQAISQ PSLEAATPEP 
QIAPQVETLV SATDFNQLVD EHKLEQQKGA VGRFLFLLES LYQQSQAQFS QILQIQGRDR
LYFARSREEL LKASATANPK EIGNTGFWVT TNNNTAKKRA ILVEALMQFG CDAQIANGIA
ERV