| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr4_2029 |
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| Symbol | |
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| ID | 4252602 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. MR-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008321 |
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| Strand | - |
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| Start bp | 2416458 |
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| End bp | 2417492 |
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| Gene Length | 1035 bp |
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| Protein Length | 344 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 638118645 |
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| Product | succinylglutamate desuccinylase |
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| Protein accession | YP_734159 |
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| Protein GI | 113970366 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG2988] Succinylglutamate desuccinylase |
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| TIGRFAM ID | [TIGR03242] succinylglutamate desuccinylase |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.0299129 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 8 |
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| Fosmid unclonability p-value | 0.000166583 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | GTGTTACAAG CTCTGTTAGA TTCGAAGGAT TTTCTCGCGC TGACCCTCGC CAATCCTGAA
ACCCTCGGAG ATGAGTTTAG TTTCACCTTA GGGGAACATA CTCGAGTCGA AGTGTGGGAC
ACCGGCGTCA TCGTTTTTGA GCCAGTACAA GCCCAAGGTA AGGATGTCAT TCTCTCCTGC
GGTGTCCACG GGAATGAAAC CGCCCCCATC GAACTCTGCA ATACCTTAAT CAAACAGCTT
CTCCAACAAA AAATCATCGC CAAACAACGC ACGCTCTTTC TTATTGGTAA CCCTTTAGCG
ATTAATAATG GGACTCGCAT TATCGACGAG AACATGAATC GTCTGTTTAG TGGCGAGCAT
TCAAACCCAC CGGGATTAGT GAATCCTGAG CGGGTGCGGG CAAAAAAATT AGAAGCCTAT
GTCGACCGCT TCTTTAAGGG CGCAGCAGCA GGGCGCCAGC GTATTCACTA CGATTTACAC
ACGGCGATGC GTGCGTCAAA ACACGAAAAG TTTGCGATTT ATCCCTATCG TCCCGGCCGT
GCTTACAGCG CCGAGCAAAT CATGTTTTTA GCGGCCAGTG GCGTCGATAC TGTGTTATTT
CACCATGAGC CGACGACCAC CTTTAGTTAT TTTTCCTCCG AGCAGTATGG CGCCGATGCC
TTTACCATTG AATTAGGTAA GGTGTATCCC ATGGGGCAAA ACGATATGAC GCGTTTTATT
GCCGCCCAAG AGATGTTTAT GCGCCTTATC ACAGACAAAC CCTTAGCGCT TGAGCCATTC
TCAGCGGATA AGGTGAATCT GTATCAAGTA TGTCGGGTGA TTAACAAACA TTTTGATGAT
TTTGAATTTA CCTTCGCGAC CGATGTCGAA AACTTCCGAT CGTTCCCGAA AGGCTTTGTA
TTGGCCCGAG AGGGTGGGCA GGAAATTAAA GTCGAACAGG AATGTGAATC GATTGTCTTC
CCCAATGCTA AGGTGCCCAT CGGCAATCGC ACTGTGATTT GCCTGATCCC TTCAGTCGCG
CCAGATGTTC GCTAG
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| Protein sequence | MLQALLDSKD FLALTLANPE TLGDEFSFTL GEHTRVEVWD TGVIVFEPVQ AQGKDVILSC
GVHGNETAPI ELCNTLIKQL LQQKIIAKQR TLFLIGNPLA INNGTRIIDE NMNRLFSGEH
SNPPGLVNPE RVRAKKLEAY VDRFFKGAAA GRQRIHYDLH TAMRASKHEK FAIYPYRPGR
AYSAEQIMFL AASGVDTVLF HHEPTTTFSY FSSEQYGADA FTIELGKVYP MGQNDMTRFI
AAQEMFMRLI TDKPLALEPF SADKVNLYQV CRVINKHFDD FEFTFATDVE NFRSFPKGFV
LAREGGQEIK VEQECESIVF PNAKVPIGNR TVICLIPSVA PDVR
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