| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr4_2025 |
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| Symbol | |
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| ID | 4252598 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. MR-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008321 |
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| Strand | - |
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| Start bp | 2411313 |
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| End bp | 2412386 |
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| Gene Length | 1074 bp |
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| Protein Length | 357 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 638118641 |
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| Product | quinolinate synthetase |
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| Protein accession | YP_734155 |
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| Protein GI | 113970362 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG0379] Quinolinate synthase |
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| TIGRFAM ID | [TIGR00550] quinolinate synthetase complex, A subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.00330504 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 6 |
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| Fosmid unclonability p-value | 0.0000127586 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGAGCCCCA GCCCATTTGC CCCAACAATC GAAACTATTG ATTATCCGTT TCCGCCTAAG
CCAATTCCTC TGTCCGATGC CGAAAAGGCG GACTACAAGG CACGTATCAA GCAGCTGCTG
ATTGAAAAAG ATGCGGTATT GGTTGCCCAT TATTATACCG ACCCTGAAAT TCAAGCGCTG
GCCGAAGAAA CCGGCGGTTG TGTTTCCGAC TCACTCGAAA TGGCGCGCTT TGGCCGCGAT
CATCCCGCCA AGACGTTAAT TGTCGCTGGG GTGAAATTTA TGGGTGAAAC CGCCAAAATC
TTAAGCCCAG AAAAAACCAT TCTGATGCCG ACCTTGGAGG CGACCTGTTC ATTGGACTTA
GGTTGCCCCA TCGATAAATT CAGCGCCTTC TGTGATGCGC ATCCTGATCA TACCGTGGTC
GTTTATGCCA ATACTTCGGC GGCGGTAAAA GCCCGTGCCG ATTGGGTGGT TACCTCGAGT
ATTGCCCTTG AAATCGTTGA GCACTTAGAC AGCGAAGGCA AAAAAATCAT TTGGGGCCCA
GACCGTCATT TAGGCAGTTA TATTGCCAAA CAAACCGGCG CCGAGATGTT GATGTGGCAG
GGCGACTGTA TCGTTCACGA TGAGTTTAAG GCCAATGCGC TGCGTGATTT AAAGCGTGTT
TACCCCGATG CCGCTATTCT AGTGCACCCA GAGTCACCCG CGAGTGTGGT GGCGATGGCG
GATGCTGTCG GCTCCACCAG CCAGTTGATT AAAGCTGCGC AAACCATGGC TAATGAGCGT
TTTATTGTGG CGACCGATCG CGGTATTTTC TACAAAATGC AACAAGCGGC GCCGGGTAAA
ACACTGATTG AAGCGCCTAC TGGCGGTAAT GGTGCCACCT GTAAGAGCTG TGCTCACTGT
CCTTGGATGG CAATGAACGG CTTAAAGGCG ATTGAAGCGT CTTTAAGTGA CAGCGACAAA
ACGACTCACG AAATCTTTGT CGATGAAGAT TTACGCGTGA AAGCCTTAAT CCCGCTGACC
CGTATGCTCG ATTTCGCTAA AACACTGAAT ATGAAAGTGA AAGGCAACGC TTAA
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| Protein sequence | MSPSPFAPTI ETIDYPFPPK PIPLSDAEKA DYKARIKQLL IEKDAVLVAH YYTDPEIQAL
AEETGGCVSD SLEMARFGRD HPAKTLIVAG VKFMGETAKI LSPEKTILMP TLEATCSLDL
GCPIDKFSAF CDAHPDHTVV VYANTSAAVK ARADWVVTSS IALEIVEHLD SEGKKIIWGP
DRHLGSYIAK QTGAEMLMWQ GDCIVHDEFK ANALRDLKRV YPDAAILVHP ESPASVVAMA
DAVGSTSQLI KAAQTMANER FIVATDRGIF YKMQQAAPGK TLIEAPTGGN GATCKSCAHC
PWMAMNGLKA IEASLSDSDK TTHEIFVDED LRVKALIPLT RMLDFAKTLN MKVKGNA
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