Gene Shewmr4_2018 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewmr4_2018 
Symbol 
ID4252591 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. MR-4 
KingdomBacteria 
Replicon accessionNC_008321 
Strand
Start bp2402315 
End bp2403127 
Gene Length813 bp 
Protein Length270 aa 
Translation table11 
GC content44% 
IMG OID638118631 
Productbax protein, putative 
Protein accessionYP_734148 
Protein GI113970355 
COG category[R] General function prediction only 
COG ID[COG2992] Uncharacterized FlgJ-related protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0000000556975 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
TTGAAAACAG GTAGAATTGG TTCGTTTACA CTCGCGTTAG CCCTAGTGAT CTTAGCGATT 
TTTTCGCTGA GAGTCTGGCT CATTCCTACT ATTGATGAGC CTGAATCTAT CGTTAACCAA
CTGGAAAACT CCGTTGATCC CGTTACTCAA GTGCCTGACT TTTCTGCCAT CAATGATGTG
GCGGAAAAAA AGCGTGCCTT TTTTGATTTT CTCAGGCCGA TCATTCAACA GCAAAATGCC
ATTATTGCCA CCGAGCGTGA CTTTATCACC GACATGTTGG CCTTAGTGGA GAACGACAGC
ACTCTGTCGG ATAAACAGTT AGCACAGCTC AATCAGTTAT TTGATAAATA TCAATATGCT
GCCCGTAATG TGGATGCAAA ATCCCTGAAC AGTTTACTCA AACGGGTCGA TATTATTCCC
GAATCTATGG TGCTTATTCA GGCGGCCAAT GAATCGGGGT GGGGTAGTTC GCGTTTTGCC
CGTGAAGGCT TTAACTTTTT CGGTGAATGG TGTTTTAGCA ATGGTTGCGG CATAGTGCCA
TCCTCTCGAG GTTCGGGCAA AACCCATGAA GTGAAAGTGT TTCCCTCGGT GGACGCTTCA
GTGTCTTCCT ATATGCGCAA TTTGAACTCG AATACGGCAT ACACGCTGTT TCGCTCAATA
CGTGCAGATT TACGCTCTCA GGAAGCCGAA TTAAGTGCCG ACCAACTGAT CTATGGACTA
GTGAATTATT CTGAAAGGCA AGAGGCTTAT ATCGACGAGT TACTCGATAT GTTACGTCAT
AATGAAAAAT ATTTGGTGAA GGCGGATGCA TAA
 
Protein sequence
MKTGRIGSFT LALALVILAI FSLRVWLIPT IDEPESIVNQ LENSVDPVTQ VPDFSAINDV 
AEKKRAFFDF LRPIIQQQNA IIATERDFIT DMLALVENDS TLSDKQLAQL NQLFDKYQYA
ARNVDAKSLN SLLKRVDIIP ESMVLIQAAN ESGWGSSRFA REGFNFFGEW CFSNGCGIVP
SSRGSGKTHE VKVFPSVDAS VSSYMRNLNS NTAYTLFRSI RADLRSQEAE LSADQLIYGL
VNYSERQEAY IDELLDMLRH NEKYLVKADA