Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewmr4_2018 |
Symbol | |
ID | 4252591 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. MR-4 |
Kingdom | Bacteria |
Replicon accession | NC_008321 |
Strand | - |
Start bp | 2402315 |
End bp | 2403127 |
Gene Length | 813 bp |
Protein Length | 270 aa |
Translation table | 11 |
GC content | 44% |
IMG OID | 638118631 |
Product | bax protein, putative |
Protein accession | YP_734148 |
Protein GI | 113970355 |
COG category | [R] General function prediction only |
COG ID | [COG2992] Uncharacterized FlgJ-related protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 3 |
Fosmid unclonability p-value | 0.0000000556975 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | TTGAAAACAG GTAGAATTGG TTCGTTTACA CTCGCGTTAG CCCTAGTGAT CTTAGCGATT TTTTCGCTGA GAGTCTGGCT CATTCCTACT ATTGATGAGC CTGAATCTAT CGTTAACCAA CTGGAAAACT CCGTTGATCC CGTTACTCAA GTGCCTGACT TTTCTGCCAT CAATGATGTG GCGGAAAAAA AGCGTGCCTT TTTTGATTTT CTCAGGCCGA TCATTCAACA GCAAAATGCC ATTATTGCCA CCGAGCGTGA CTTTATCACC GACATGTTGG CCTTAGTGGA GAACGACAGC ACTCTGTCGG ATAAACAGTT AGCACAGCTC AATCAGTTAT TTGATAAATA TCAATATGCT GCCCGTAATG TGGATGCAAA ATCCCTGAAC AGTTTACTCA AACGGGTCGA TATTATTCCC GAATCTATGG TGCTTATTCA GGCGGCCAAT GAATCGGGGT GGGGTAGTTC GCGTTTTGCC CGTGAAGGCT TTAACTTTTT CGGTGAATGG TGTTTTAGCA ATGGTTGCGG CATAGTGCCA TCCTCTCGAG GTTCGGGCAA AACCCATGAA GTGAAAGTGT TTCCCTCGGT GGACGCTTCA GTGTCTTCCT ATATGCGCAA TTTGAACTCG AATACGGCAT ACACGCTGTT TCGCTCAATA CGTGCAGATT TACGCTCTCA GGAAGCCGAA TTAAGTGCCG ACCAACTGAT CTATGGACTA GTGAATTATT CTGAAAGGCA AGAGGCTTAT ATCGACGAGT TACTCGATAT GTTACGTCAT AATGAAAAAT ATTTGGTGAA GGCGGATGCA TAA
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Protein sequence | MKTGRIGSFT LALALVILAI FSLRVWLIPT IDEPESIVNQ LENSVDPVTQ VPDFSAINDV AEKKRAFFDF LRPIIQQQNA IIATERDFIT DMLALVENDS TLSDKQLAQL NQLFDKYQYA ARNVDAKSLN SLLKRVDIIP ESMVLIQAAN ESGWGSSRFA REGFNFFGEW CFSNGCGIVP SSRGSGKTHE VKVFPSVDAS VSSYMRNLNS NTAYTLFRSI RADLRSQEAE LSADQLIYGL VNYSERQEAY IDELLDMLRH NEKYLVKADA
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