Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewmr4_2009 |
Symbol | |
ID | 4252582 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. MR-4 |
Kingdom | Bacteria |
Replicon accession | NC_008321 |
Strand | + |
Start bp | 2393809 |
End bp | 2394777 |
Gene Length | 969 bp |
Protein Length | 322 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 638118622 |
Product | cytochrome c oxidase, cbb3-type, subunit III |
Protein accession | YP_734139 |
Protein GI | 113970346 |
COG category | [C] Energy production and conversion |
COG ID | [COG2010] Cytochrome c, mono- and diheme variants |
TIGRFAM ID | [TIGR00782] cytochrome c oxidase, cbb3-type, subunit III |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.0902386 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 3 |
Fosmid unclonability p-value | 0.0000000272898 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGAGTAGCT TCTGGAGTAT TTGGATTAGC GTACTCTCGT TAATTGTGAT CGCAGGATGT TTTCTGTTGC TGCGTGTGTG TTCAAAGAAC ACCACGGATG TCAAAGAAGG CGAATCTATG GGTCACAGTT TCGATGGTAT CGAAGAACTC AATAACCCAC TGCCAAAATG GTGGAGTTAT ATGTTCTATA TCACTATCGT GTTTGGCCTG GTTTACTTAG CCCTCTTCCC AGGTTTAGGT AACTACAAAG GTCTACTGAA CTGGACCAGC TCTAACCAGA GCATTGGTAC AGAGAAAGGT ATTAAAGCCG ATTCTGCAGC AGCGGTTGAG CTGGCTGCAA AAGAAGGCAT GTACGTTCAG TATGATCAAG AAGTTAAACA TGCTAACGAA AAATATGGCC CAATCTTCGC GGCTTACTTG GCTACACCAC TCGAAGAGTT AGTGAAAAAC CAAGAAGCGT TGAAAGTGGG CGGCCGTTTG TTCCTACAAA ACTGCGCTCA GTGCCATGGC TCTGACGCAC GTGGTAGCAA AGGCTTCCCT AACCTGACCG ACAGTGATTG GTTATATGGT GGTGATTTAG CCACTATCAA GACCACTATC ATGAACGGTC GTCATGGCAT GATGCCACCA AAAGGTGGTT TGCCAATCGA CGATAGCGAA ATTGCAGGTC TAGCCGAGTA CGTAGTTAAG TTATCTGGCC GTGAGCACGA CGAGAAACTC GCCGCTCAAG GTCAAGGTTC ATTCATGAAG GGTTGTTTTG CGTGTCACGG TATGGACGCA AAAGGCAACA AACTCATGGG CGCACCTAAC TTAACTGACG ATGTTTGGTT ATATGGCGGT AGCCGCGGCA TGATCGAAGA AACGATCAAG CACGGCCGCG CAGGCGTAAT GCCAGCATGG AAAGACGTTC TCGGTGAAGA GAAAGTCCAC GTGATCGCAG CTTATGTTTA TAGCTTGTCA AACAAGTAA
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Protein sequence | MSSFWSIWIS VLSLIVIAGC FLLLRVCSKN TTDVKEGESM GHSFDGIEEL NNPLPKWWSY MFYITIVFGL VYLALFPGLG NYKGLLNWTS SNQSIGTEKG IKADSAAAVE LAAKEGMYVQ YDQEVKHANE KYGPIFAAYL ATPLEELVKN QEALKVGGRL FLQNCAQCHG SDARGSKGFP NLTDSDWLYG GDLATIKTTI MNGRHGMMPP KGGLPIDDSE IAGLAEYVVK LSGREHDEKL AAQGQGSFMK GCFACHGMDA KGNKLMGAPN LTDDVWLYGG SRGMIEETIK HGRAGVMPAW KDVLGEEKVH VIAAYVYSLS NK
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